RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MGAT2Q10469 447 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 CEBPEQ15744 281 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 TRMT12Q53H54 448 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 TTMPQ5BVD1 217 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF628Q5EBL2 1059 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF227Q86WZ6 799 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 LIX1Q8N485 282 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 GOLM1Q8NBJ4 401 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 POGLUT1Q8NBL1 392 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ST6GALNAC3Q8NDV1 305 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 FAM13CQ8NE31 585 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ZFP28Q8NHY6 868 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 TP53INP1Q96A56 240 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 CTHRC1Q96CG8 243 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF764Q96H86 408 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 MANSC1Q9H8J5 431 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 BAIAP2L1Q9UHR4 511 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 HAO1Q9UJM8 370 aa17.08■□□□□ 0.32
PRPF40B-216ENST00000552301 ASPDHA6ND91 283 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 COQ9O75208 318 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 NADKO95544 446 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 CBX7O95931 251 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 P04436 131 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF24P17028 368 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 S1PR1P21453 382 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 GPX3P22352 226 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 MEOX1P50221 254 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 GPR85P60893 370 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 MRPL49Q13405 166 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 IL23RQ5VWK5 629 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 ANKRD26P1Q6NSI1 321 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 MDGA2Q7Z553 956 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 C17orf47Q8NEP4 570 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 DYDC1Q8WWB3 177 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 MTERF3Q96E29 417 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 FRMD6Q96NE9 622 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 SH3GL2Q99962 352 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 SLX1AQ9BQ83 275 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 ITPAQ9BY32 194 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 NUF2Q9BZD4 464 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 SACM1LQ9NTJ5 587 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 PNPOQ9NVS9 261 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF639Q9UID6 485 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 EXO1Q9UQ84 846 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 MYO18BQ8IUG5 2567 aa17.07■□□□□ 0.32
PRPF40B-216ENST00000552301 PEX1O43933 1283 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF354AO60765 605 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 FBXO45P0C2W1 286 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 GPC1P35052 558 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 DCAF7P61962 342 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 NNATQ16517 81 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 SULF2Q8IWU5 870 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 CPSF7Q8N684 471 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF441Q8N8Z8 693 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 ZBED6CLQ96FA7 236 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 GLIPR2Q9H4G4 154 aa17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 DDX18Q9NVP1 670 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 NOP53Q9NZM5 478 aaKnown RBP17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 MARCOQ9UEW3 520 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-216ENST00000552301 TP53I11O14683 189 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 SCAMP2O15127 329 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 PLOD3O60568 738 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 TBX19O60806 448 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 SNNO75324 88 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 CBX6O95503 412 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 MC3RP41968 323 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 PLGLB1Q02325 96 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 EMX2Q04743 252 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF155Q12901 538 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 HSPB3Q12988 150 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 PDE7AQ13946 482 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 PTGR1Q14914 329 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 PRSS53Q2L4Q9 553 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 SMU1Q2TAY7 513 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 SLC22A10Q63ZE4 541 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF324BQ6AW86 544 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 TMEM107Q6UX40 140 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 GFRALQ6UXV0 394 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 GK5Q6ZS86 529 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 FAM47EQ6ZV65 393 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 OR7G2Q8NG99 324 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 OR5M3Q8NGP4 307 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 ADIPOR1Q96A54 375 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 LCORQ96JN0 433 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 AMDHD1Q96NU7 426 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 PRPF18Q99633 342 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 NXF5Q9H1B4 397 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 AKTIPQ9H8T0 292 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 ATAD3AQ9NVI7 634 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 TAS2R9Q9NYW1 312 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 DTX4Q9Y2E6 619 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 NPFFR2Q9Y5X5 522 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 ZGRF1Q86YA3 2104 aa17.05■□□□□ 0.32
PRPF40B-216ENST00000552301 A0A087WV62 115 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 TRPC5OSA6NMA1 111 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 SLCO1B7G3V0H7 640 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 G3V3Y1 287 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 ACOT7O00154 380 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 TFECO14948 347 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms