RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SEPT10Q9P0V9 454 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 VPS18Q9P253 973 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ATXN10Q9UBB4 475 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 UBA2Q9UBT2 640 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SLC12A6Q9UHW9 1150 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PPIEQ9UNP9 301 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ENTPD4Q9Y227 616 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 BTRCQ9Y297 605 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RPH3AQ9Y2J0 694 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PTRH2Q9Y3E5 179 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 FAM169AQ9Y6X4 670 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 FLNAP21333 2647 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ANKRD36A6QL64 1941 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TLN2Q9Y4G6 2542 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 AKAP6Q13023 2319 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TNRC6AQ8NDV7 1962 aaKnown RBP2.21□□□□□ -2.05
CPSF6-207ENST00000551516 FER1L5A0AVI2 2057 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MED13LQ71F56 2210 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 DIDO1Q9BTC0 2240 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 IGLV3-16A0A075B6K0 115 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 A0A0G2JNG1 304 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 LOC285095A0A1B0GVY8 99 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 FAM170AA1A519 330 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 VSTM2BA6NLU5 285 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ENO4A6NNW6 628 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 A8MX80 341 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GOLGA8SH3BPF8 625 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 SOCS2O14508 198 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PSMA7O14818 248 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 WNT9BO14905 357 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ADAM20O43506 726 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 BUB1O43683 1085 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KIAA0754O94854 1291 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 LCA5LO95447 670 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 FTCDO95954 541 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ATP1A1P05023 1023 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PCCBP05166 539 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 TPOP07202 933 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 TUBBP07437 444 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ABCB1P08183 1280 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CYC1P08574 325 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CD48P09326 243 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 RAB40ALP0C0E4 278 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PRKAR1AP10644 381 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 G6PDP11413 515 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KRT3P12035 628 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MAOAP21397 527 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ITGA3P26006 1051 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MIPP30301 263 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 HOXD3P31249 432 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PCK1P35558 622 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PRKCIP41743 596 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ACTR1BP42025 376 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MSH2P43246 934 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GNPDA1P46926 289 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CAPZBP47756 277 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KPNA2P52292 529 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 NUDT6P53370 316 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CTSCP53634 463 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 DCDC1P59894 354 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ACTR1AP61163 376 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MAXP61244 160 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 RHOAP61586 193 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 AP1S1P61966 158 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 SSBP2P81877 361 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 XIAPP98170 497 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ROR2Q01974 943 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 TFF3Q07654 80 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 CDC16Q13042 620 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GRB7Q14451 532 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KRT33BQ14525 404 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KIR2DS5Q14953 304 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PAFAH1B3Q15102 231 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 AMZ1Q400G9 498 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PPP6R3Q5H9R7 873 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 FNBP1LQ5T0N5 605 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 DCST1Q5T197 706 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 LRRC66Q68CR7 880 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 NCBP2-AS2Q69YL0 99 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 TYW3Q6IPR3 259 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 RPUSD3Q6P087 351 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KCTD18Q6PI47 426 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 KDELC1Q6UW63 502 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 LRRC31Q6UY01 552 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 B3GNT6Q6ZMB0 384 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 GBP6Q6ZN66 633 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 Q6ZPB1 254 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 COLCA1Q6ZS62 124 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 Q6ZSV7 163 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 COX15Q7KZN9 410 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF571Q7Z3V5 609 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 PHLDB2Q86SQ0 1253 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 SDCCAG8Q86SQ7 713 aaPredicted RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 SYVN1Q86TM6 617 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ZC3HC1Q86WB0 502 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF677Q86XU0 584 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 LINC00346Q8IVM7 164 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 MCEMP1Q8IX19 187 aa2.21□□□□□ -2.06
CPSF6-207ENST00000551516 SRRM1Q8IYB3 904 aaKnown RBP2.21□□□□□ -2.06
CPSF6-207ENST00000551516 NIPA2Q8N8Q9 360 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms