RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PRR14LQ5THK1 2151 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 STAB1Q9NY15 2570 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ARID1AO14497 2285 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 TCRBV9S1A1TA0A576 114 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 EFCAB8A8MWE9 144 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 B4DXG7 233 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 H0YC42 278 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 SYT5O00445 386 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 PPP6CO00743 305 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 GMFGO60234 142 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 SUSD5O60279 629 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 OR10H2O60403 315 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 TRIM3O75382 744 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 BPNT1O95861 308 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 LY6G6DO95868 133 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 C1QAP02745 245 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC35E2BP0CK96 405 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 MTHFD2P13995 350 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 ALOX15P16050 662 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 BSGP35613 385 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 GGT5P36269 586 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 FEN1P39748 380 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 HNMTP50135 292 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 TPD52P55327 224 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 IGLV3-21P80748 117 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 CDKL1Q00532 357 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 C2orf54Q08AI8 447 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 EBPQ15125 230 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 LTB4RQ15722 352 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 CPSF6Q16630 551 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC25A35Q3KQZ1 300 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 FLYWCH1Q4VC44 716 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 RIPPLY2Q5TAB7 128 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 DEPDC1Q5TB30 811 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 SULT1C3Q6IMI6 304 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 MED27Q6P2C8 311 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 RNF111Q6ZNA4 994 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 C22orf34Q6ZV56 151 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 RAPH1Q70E73 1250 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 GALNT7Q86SF2 657 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 ISCA2Q86U28 154 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 GPR180Q86V85 440 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 PRIMA1Q86XR5 153 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 GPALPP1Q8IXQ4 340 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 LRRC25Q8N386 305 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 FBXW8Q8N3Y1 598 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 BBOF1Q8ND07 529 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 OR5L2Q8NGL0 311 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 OR5M1Q8NGP8 315 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 RIT1Q92963 219 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 INTS12Q96CB8 462 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 RBM18Q96H35 190 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 NODALQ96S42 347 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 HBEGFQ99075 208 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 NAP1L3Q99457 506 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 TUBA1CQ9BQE3 449 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 TBCDQ9BTW9 1192 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 NXF5Q9H1B4 397 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 NT5DC2Q9H857 520 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 PLEKHF2Q9H8W4 249 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 CLK4Q9HAZ1 481 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 LYRM4Q9HD34 91 aa6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 FARSBQ9NSD9 589 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-214ENST00000551320 DOCK7Q96N67 2140 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 A0A088AWK7 358 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 A0A0A6YYD5 115 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 IQANK1A0A1B0GTG1 560 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 TRIM64A6NGJ6 449 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 TUBAL3A6NHL2 446 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 TRIM64BA6NI03 449 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CLCA1A8K7I4 914 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 HCN1O60741 890 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 WDR1O75083 606 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 GPR75O95800 540 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 S100BP04271 92 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 KLK1P06870 262 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM58BPP0C7Q3 252 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CTAGE8P0CG41 777 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 COX7A2P14406 83 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 STMN1P16949 149 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF10P21506 573 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 NT5EP21589 574 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CEACAM8P31997 349 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ARL1P40616 181 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 CASP3P42574 277 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MASP1P48740 699 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 ASCL1P50553 236 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 NR1H2P55055 460 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 RAB10P61026 200 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MRPS35P82673 323 aaKnown RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 POU4F1Q01851 419 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 TNFRSF17Q02223 184 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 SERTAD2Q14140 314 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 KEAP1Q14145 624 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MPP2Q14168 576 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 HIST2H2ACQ16777 129 aaPredicted RBP6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 PFKFB4Q16877 469 aa6.23□□□□□ -1.41
PRPF40B-214ENST00000551320 MPEG1Q2M385 716 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms