RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 NANOGQ9H9S0 305 aa11.3□□□□□ -0.6
ERBB3-216ENST00000550869 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
ERBB3-216ENST00000550869 TMEM181Q9P2C4 612 aa11.3□□□□□ -0.6
ERBB3-216ENST00000550869 ZNF639Q9UID6 485 aa11.3□□□□□ -0.6
ERBB3-216ENST00000550869 TP53TG5Q9Y2B4 290 aa11.3□□□□□ -0.6
ERBB3-216ENST00000550869 MRPS18BQ9Y676 258 aaKnown RBP11.3□□□□□ -0.6
ERBB3-216ENST00000550869 PRRC2CQ9Y520 2896 aaKnown RBP11.3□□□□□ -0.6
ERBB3-216ENST00000550869 UTP20O75691 2785 aaKnown RBP11.3□□□□□ -0.6
ERBB3-216ENST00000550869 A0A087WV62 115 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 TCRBV16S1A1N1A0A5B0 115 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 OR2W5A6NFC9 320 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 GYG2O15488 501 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 GSC2O15499 205 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PLOD3O60568 738 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CDC123O75794 336 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CPSF4O95639 269 aaKnown RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CD63P08962 238 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 RAB40ALP0C0E4 278 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 GPX2P18283 190 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 S1PR1P21453 382 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 UQCRC2P22695 453 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 STT3AP46977 705 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CDK9P50750 372 aaKnown RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 NCBP2P52298 156 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 MVDP53602 400 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PSME3P61289 254 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PLIN5Q00G26 463 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 ID2Q02363 134 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 OCA2Q04671 838 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 MAP4K2Q12851 820 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 GAB1Q13480 694 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 DNASE1L3Q13609 305 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 IGFBP7Q16270 282 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PRICKLE4Q2TBC4 344 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 ZNF628Q5EBL2 1059 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 ATP1A1-AS1Q5TC04 95 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 FHL5Q5TD97 284 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PGM2L1Q6PCE3 622 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 TMEM151BQ8IW70 566 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 DEFB107AQ8IZN7 70 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 OR4A15Q8NGL6 344 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 THAP4Q8WY91 577 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 TMEM125Q96AQ2 219 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 ELP4Q96EB1 424 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 RNF31Q96EP0 1072 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PTCHD1Q96NR3 888 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CPPED1Q9BRF8 314 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PELOQ9BRX2 385 aaKnown RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 SLC39A3Q9BRY0 314 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CADM1Q9BY67 442 aaKnown RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 RBCK1Q9BYM8 510 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CXorf36Q9H7Y0 433 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■■■■□ 19.9
ERBB3-216ENST00000550869 GPATCH2Q9NW75 528 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 IFT80Q9P2H3 777 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 CD300AQ9UGN4 299 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PRPF19Q9UMS4 504 aaKnown RBP11.29□□□□□ -0.6
ERBB3-216ENST00000550869 PCDHGB4Q9UN71 923 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 NBPF19A0A087WUL8 3843 aa11.29□□□□□ -0.6
ERBB3-216ENST00000550869 USP9XQ93008 2570 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 C15orf38-AP3S2A0A0A6YYH1 394 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 DNAJC8O75937 253 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 PSMG1O95456 288 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 GSNP06396 782 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 ABCB1P08183 1280 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 MAOAP21397 527 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 GZMMP51124 257 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 NCF4Q15080 339 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 SPATS1Q496A3 300 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 EXOSC6Q5RKV6 272 aaKnown RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 SAXO2Q658L1 398 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 FAM199XQ6PEV8 388 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 DGAT2L6Q6ZPD8 337 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 ZNF621Q6ZSS3 439 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 ARPINQ7Z6K5 226 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 ARHGAP24Q8N264 748 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 OR2L13Q8N349 312 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 OR9A2Q8NGT5 310 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 SFXN5Q8TD22 340 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 HOXB13Q92826 284 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 MR1Q95460 341 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 YIPF2Q9BWQ6 316 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 MMADHCQ9H3L0 296 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-216ENST00000550869 IKZF5Q9H5V7 419 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 CXorf21Q9HAI6 301 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 TPT1P8Q9HAU6 139 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 IL1RL2Q9HB29 575 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 MAT2BQ9NZL9 334 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
ERBB3-216ENST00000550869 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms