RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 FOSL1P15407 271 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 BMP7P18075 431 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 PHBP35232 272 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 SERPINB8P50452 374 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 SORDQ00796 357 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 IRF9Q00978 393 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 C2orf54Q08AI8 447 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 KEAP1Q14145 624 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 FRG2Q64ET8 278 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 TIGD3Q6B0B8 471 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 SLC30A6Q6NXT4 461 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 NUP54Q7Z3B4 507 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 ZNF615Q8N8J6 731 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 ADIPOR1Q96A54 375 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 MBD6Q96DN6 1003 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 MRRFQ96E11 262 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 FRG2BQ96QU4 278 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 YIPF4Q9BSR8 244 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 SLC6A5Q9Y345 797 aa21.1■□□□□ 0.97
SMARCD1-209ENST00000550477 EEF1E1-BLOC1S5C9J1V9 151 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 EEF1E1O43324 174 aaKnown RBP21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 ERN1O75460 977 aaKnown RBP21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 RAF1P04049 648 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 ABCD3P28288 659 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 ZNF136P52737 540 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 MAPK12P53778 367 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 BICRALQ6AI39 1079 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 ENPP6Q6UWR7 440 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 VWA5B2Q8N398 1253 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 ZPLD1Q8TCW7 415 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 TRPC4APQ8TEL6 797 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 ZFP3Q96NJ6 502 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 NTMT1Q9BV86 223 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 UGT2B28Q9BY64 529 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 BRINP2Q9C0B6 783 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 VPS11Q9H270 941 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 NMRK1Q9NWW6 199 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 FETUBQ9UGM5 382 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 BCAP29Q9UHQ4 241 aa21.09■□□□□ 0.97
SMARCD1-209ENST00000550477 C1orf226A1L170 272 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 MBD3L4A6NDZ8 208 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 MBD3L3A6NE82 208 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 LRRC14BA6NHZ5 514 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 MBD3L5A6NJ08 208 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 GNB5O14775 395 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 PPM1BO75688 479 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 SIX3O95343 332 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 ABCB1P08183 1280 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 CT62P0C5K7 136 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 DCAF7P61962 342 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 EEF1A1P68104 462 aaKnown RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 SNTA1Q13424 505 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 EIPR1Q53HC9 387 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 WIPI1Q5MNZ9 446 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 EEF1A1P5Q5VTE0 462 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 PRR22Q8IZ63 422 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 MBD3L2Q8NHZ7 208 aaPredicted RBP21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 UCN3Q969E3 161 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 WDYHV1Q96HA8 205 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 ACBD3Q9H3P7 528 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 ELOVL6Q9H5J4 265 aa21.08■□□□□ 0.97
SMARCD1-209ENST00000550477 NAV3Q8IVL0 2385 aa21.08■□□□□ 0.96
SMARCD1-209ENST00000550477 ACOX3O15254 700 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 SMIM24O75264 130 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 CBR3O75828 277 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 RHOXF2BP0C7M4 288 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 CSNK2A2P19784 350 aaPredicted RBP21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 GPX3P22352 226 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 WNT3P56703 355 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 TMEM81Q6P7N7 255 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 ANGPTL8Q6UXH0 198 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 PAMR1Q6UXH9 720 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 MILR1Q7Z6M3 343 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 PTGR2Q8N8N7 351 aaPredicted RBP21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 PHF21BQ96EK2 531 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 LCORQ96JN0 433 aaPredicted RBP21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 CDK15Q96Q40 435 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 TM9SF2Q99805 663 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 FAIM2Q9BWQ8 316 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 KLRF1Q9NZS2 232 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 PRODH2Q9UF12 536 aa21.07■□□□□ 0.96
SMARCD1-209ENST00000550477 STX16-NPEPL1H3BU86 382 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 STX16O14662 325 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 ERAL1O75616 437 aaKnown RBP21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 TMIGD3P0DMS9 266 aaPredicted RBP21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 PTPN6P29350 595 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 CASQ1P31415 396 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 MAP4K2Q12851 820 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 FNDC7Q5VTL7 733 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 FAM83FQ8NEG4 500 aaPredicted RBP21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 OSBPL11Q9BXB4 747 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 NXF5Q9H1B4 397 aaKnown RBP21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 PCDHA9Q9Y5H5 950 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 ZNF780BQ9Y6R6 833 aa21.06■□□□□ 0.96
SMARCD1-209ENST00000550477 OR7A17O14581 309 aa21.05■□□□□ 0.96
SMARCD1-209ENST00000550477 CASKO14936 926 aa21.05■□□□□ 0.96
SMARCD1-209ENST00000550477 CPA2P48052 419 aa21.05■□□□□ 0.96
SMARCD1-209ENST00000550477 AGFG1P52594 562 aaKnown RBP21.05■□□□□ 0.96
SMARCD1-209ENST00000550477 GUCY2DQ02846 1103 aa21.05■□□□□ 0.96
SMARCD1-209ENST00000550477 PLCXD2Q0VAA5 305 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms