RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ADIPOR1Q96A54 375 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 DPY30Q9C005 99 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 EPN3Q9H201 632 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 DTX4Q9Y2E6 619 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 PCDHGA10Q9Y5H3 936 aa20.85■□□□□ 0.93
BRF1-216ENST00000550208 TCP11X1B4DZS4 312 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 ANKRD28O15084 1053 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 PLOD3O60568 738 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 NADKO95544 446 aaPredicted RBP20.84■□□□□ 0.93
BRF1-216ENST00000550208 GPX3P22352 226 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 SOX3P41225 446 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 FRKP42685 505 aaPredicted RBP20.84■□□□□ 0.93
BRF1-216ENST00000550208 NR0B1P51843 470 aaKnown RBP20.84■□□□□ 0.93
BRF1-216ENST00000550208 MANFP55145 182 aaKnown RBP20.84■□□□□ 0.93
BRF1-216ENST00000550208 C21orf58P58505 322 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 ZNF766Q5HY98 468 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 HLA-DQA1Q5Y7H0 255 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 TMEM107Q6UX40 140 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 IL20RBQ6UXL0 311 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 CISD2Q8N5K1 135 aaKnown RBP20.84■□□□□ 0.93
BRF1-216ENST00000550208 ERP27Q96DN0 273 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 ELP4Q96EB1 424 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 MAGED4Q96JG8 741 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 PRPF18Q99633 342 aaKnown RBP20.84■□□□□ 0.93
BRF1-216ENST00000550208 HES7Q9BYE0 225 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 AIG1Q9NVV5 245 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 CFAP46Q8IYW2 2715 aa20.84■□□□□ 0.93
BRF1-216ENST00000550208 PLOD2O00469 737 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 DYNC1I1O14576 645 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 SLC28A2O43868 658 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 BCAS2O75934 225 aaPredicted RBP20.83■□□□□ 0.93
BRF1-216ENST00000550208 TGDSO95455 350 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 MC3RP41968 323 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 IDH3AP50213 366 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 NME5P56597 212 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 HSPB3Q12988 150 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 PGS1Q32NB8 556 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 LSM12Q3MHD2 195 aaKnown RBP20.83■□□□□ 0.93
BRF1-216ENST00000550208 PRR30Q53SZ7 412 aaPredicted RBP20.83■□□□□ 0.93
BRF1-216ENST00000550208 TMEM198Q66K66 360 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 SLC25A25Q6KCM7 469 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 LYPD8Q6UX82 237 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 ZNF605Q86T29 641 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 CEP70Q8NHQ1 597 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 TP53INP1Q96A56 240 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 ZBED6CLQ96FA7 236 aaPredicted RBP20.83■□□□□ 0.93
BRF1-216ENST00000550208 KLHL1Q9NR64 748 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 ACSS1Q9NUB1 689 aaPredicted RBP20.83■□□□□ 0.93
BRF1-216ENST00000550208 PRODH2Q9UF12 536 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 CFL2Q9Y281 166 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 GPR45Q9Y5Y3 372 aa20.83■□□□□ 0.93
BRF1-216ENST00000550208 A0A087WV62 115 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 A8MVJ9 347 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 EDF1O60869 148 aaKnown RBP20.82■□□□□ 0.92
BRF1-216ENST00000550208 SP1P08047 785 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 CD46P15529 392 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 DDX5P17844 614 aaKnown RBP20.82■□□□□ 0.92
BRF1-216ENST00000550208 GPC1P35052 558 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 CDK9P50750 372 aaKnown RBP20.82■□□□□ 0.92
BRF1-216ENST00000550208 UFM1P61960 85 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 GUCY1A3Q02108 690 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 INPP5JQ15735 1006 aaPredicted RBP20.82■□□□□ 0.92
BRF1-216ENST00000550208 OPN5Q6U736 354 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 TMEM64Q6YI46 380 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 SLC15A4Q8N697 577 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 HORMAD2Q8N7B1 307 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 ZFP28Q8NHY6 868 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 SLC22A8Q8TCC7 542 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 THOC1Q96FV9 657 aaKnown RBP20.82■□□□□ 0.92
BRF1-216ENST00000550208 EBF4Q9BQW3 602 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 DUSP26Q9BV47 211 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 ITPAQ9BY32 194 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 ATAD3AQ9NVI7 634 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 HPF1Q9NWY4 346 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 C19orf53Q9UNZ5 99 aaPredicted RBP20.82■□□□□ 0.92
BRF1-216ENST00000550208 ERVK-11Q9UQG0 969 aa20.82■□□□□ 0.92
BRF1-216ENST00000550208 A0A1W2PRB8 838 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 UPK1AO00322 258 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 SLITRK5O94991 958 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 AQP5P55064 265 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 MAPKAPK3Q16644 382 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 RPUSD3Q6P087 351 aaKnown RBP20.81■□□□□ 0.92
BRF1-216ENST00000550208 MDGA2Q7Z553 956 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 GPALPP1Q8IXQ4 340 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 CYP4Z2PQ8N1L4 340 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 SNRNP40Q96DI7 357 aaKnown RBP20.81■□□□□ 0.92
BRF1-216ENST00000550208 SCMH1Q96GD3 660 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 MARK4Q96L34 752 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 TEX37Q96LM6 180 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 C5orf34Q96MH7 638 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 BHLHE41Q9C0J9 482 aaPredicted RBP20.81■□□□□ 0.92
BRF1-216ENST00000550208 NXF5Q9H1B4 397 aaKnown RBP20.81■□□□□ 0.92
BRF1-216ENST00000550208 MAPRE3Q9UPY8 281 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 NTNG1Q9Y2I2 539 aa20.81■□□□□ 0.92
BRF1-216ENST00000550208 SMG1Q96Q15 3661 aaKnown RBP20.81■□□□□ 0.92
BRF1-216ENST00000550208 SLC25A12O75746 678 aa20.8■□□□□ 0.92
BRF1-216ENST00000550208 PPICP45877 212 aa20.8■□□□□ 0.92
BRF1-216ENST00000550208 TLE1Q04724 770 aa20.8■□□□□ 0.92
BRF1-216ENST00000550208 MLC1Q15049 377 aa20.8■□□□□ 0.92
BRF1-216ENST00000550208 NNATQ16517 81 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms