RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SPIBQ01892 262 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 GAS6Q14393 721 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 TBCEQ15813 527 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 NPTX1Q15818 432 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 C1orf94Q6P1W5 598 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF438Q7Z4V0 828 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 CAMKK1Q8N5S9 505 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 C7orf57Q8NEG2 295 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SLC37A2Q8TED4 501 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 PROX1Q92786 737 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 LHPPQ9H008 270 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 NMNAT1Q9HAN9 279 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ZCCHC3Q9NUD5 404 aaKnown RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MRPS18AQ9NVS2 196 aaKnown RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SCN3BQ9NY72 215 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 RAB23Q9ULC3 237 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MRPS17Q9Y2R5 130 aaKnown RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 PRR23AA6NEV1 266 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 SRPX2O60687 465 aaPredicted RBP9.37□□□□□ -0.91
RAB5B-206ENST00000549505 FMO6PO60774 539 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 DIRAS1O95057 198 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 THEGLP0DJG4 465 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 OSMP13725 252 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ALOX12P18054 663 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ALDH9A1P49189 494 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 BTN3A2P78410 334 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 EMX1Q04741 257 aaPredicted RBP9.37□□□□□ -0.91
RAB5B-206ENST00000549505 BIKQ13323 160 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 GPR19Q15760 415 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 KLHL17Q6TDP4 642 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ADCK2Q7Z695 626 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ATG16L2Q8NAA4 619 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 KCT2Q8NC54 265 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 OR4K14Q8NGD5 310 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ALPK1Q96QP1 1244 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 LRRC61Q9BV99 259 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 CDCA4Q9BXL8 241 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 RACGAP1Q9H0H5 632 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 DUSP22Q9NRW4 184 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 IFT52Q9Y366 437 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 CHST2Q9Y4C5 530 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF99A8MXY4 864 aaPredicted RBP9.37□□□□□ -0.91
RAB5B-206ENST00000549505 H0YGG7 62 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 KLF4O43474 513 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 HMGN2P05204 90 aaKnown RBP9.37□□□□□ -0.91
RAB5B-206ENST00000549505 KRT20P35900 424 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 RAB38P57729 211 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 ARF3P61204 181 aaPredicted RBP9.37□□□□□ -0.91
RAB5B-206ENST00000549505 SYPL1Q16563 259 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 SPDYE7PQ495Y7 208 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 COMTD1Q86VU5 262 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 OOSP2Q86WS3 158 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 CA13Q8N1Q1 262 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 NUP43Q8NFH3 380 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 KLHDC7BQ96G42 594 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 NIPSNAP1Q9BPW8 284 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 RIBC2Q9H4K1 309 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 FANCEQ9HB96 536 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 NECTIN3Q9NQS3 549 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 RLIMQ9NVW2 624 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 KIF17Q9P2E2 1029 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 FAM32AQ9Y421 112 aaKnown RBP9.37□□□□□ -0.91
RAB5B-206ENST00000549505 TESMINQ9Y4I5 508 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 SNX8Q9Y5X2 465 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 REV3LO60673 3130 aa9.37□□□□□ -0.91
RAB5B-206ENST00000549505 CLDN24A6NM45 220 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 PCDH17O14917 1159 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 B4GAT1O43505 415 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 OPN1SWP03999 348 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 H1F0P07305 194 aaKnown RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CPMP14384 443 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 MAGP20916 626 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 EPHA2P29317 976 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 AQP1P29972 269 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 TLX1P31314 330 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CRISP1P54107 249 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CDH12P55289 794 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 MAP4K2Q12851 820 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 DUSP8Q13202 625 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 OCLNQ16625 522 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ZSWIM7Q19AV6 140 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 RPS26P11Q5JNZ5 115 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 GARNL3Q5VVW2 1013 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 FRMPD2BQ6IN97 320 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 PGBD2Q6P3X8 592 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 TNFAIP8L2Q6P589 184 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 Q6ZS52 159 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 FAM20CQ8IXL6 584 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CLDN22Q8N7P3 220 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 DNASE2BQ8WZ79 361 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 NMD3Q96D46 503 aaKnown RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 MPP4Q96JB8 637 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CENPOQ9BU64 300 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF350Q9GZX5 532 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 PIGUQ9H490 435 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CLCA1A8K7I4 914 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 H3BMH7 237 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 SEC24DO94855 1032 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms