RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 BRAT1Q6PJG6 821 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 IQCHQ86VS3 1027 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 OR4M2Q8NGB6 313 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 AKAP1Q92667 903 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 NEURL3Q96EH8 262 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 KCNJ15Q99712 375 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 TMED9Q9BVK6 235 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 RIOK2Q9BVS4 552 aaKnown RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ABCG4Q9H172 646 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 NARFLQ9H6Q4 476 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF334Q9HCZ1 680 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 CTPS2Q9NRF8 586 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 B4GALT2O60909 372 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SOD1P00441 154 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 LIMS3P0CW19 117 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 LIMS4P0CW20 117 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 PNLIPRP1P54315 467 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ALDH6A1Q02252 535 aaKnown RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SF3A2Q15428 464 aaKnown RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SDE2Q6IQ49 451 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 Q6ZVU0 165 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 OLIG3Q7RTU3 272 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 DNAJB7Q7Z6W7 309 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SLC9A6Q92581 669 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 TRMT2BQ96GJ1 504 aaKnown RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 IGSF21Q96ID5 467 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 TRAF4Q9BUZ4 470 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 C5AR2Q9P296 337 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SEC14L3Q9UDX4 400 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SLC5A10A0PJK1 596 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 C1GALT1C1LP0DN25 315 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ACP2P11117 423 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ACADMP11310 421 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 ITGB8P26012 769 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 KLHL22Q53GT1 634 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 SLC25A30Q5SVS4 291 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 KIAA1841Q6NSI8 718 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 CD200R1LQ6Q8B3 271 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
HDAC7-228ENST00000548938 LHFPL3Q86UP9 236 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 OR8H1Q8NGG4 311 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 EFCAB11Q9BUY7 163 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 EGLN3Q9H6Z9 239 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 TBC1D17Q9HA65 648 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 DYRK1BQ9Y463 629 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 CDH10Q9Y6N8 788 aa12.97□□□□□ -0.33
HDAC7-228ENST00000548938 CTSAP10619 480 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 EFNB1P98172 346 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 RAB40BQ12829 278 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 HSPB3Q12988 150 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 B3GLCTQ6Y288 498 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 TRILQ7L0X0 811 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 MARCH9Q86YJ5 346 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 TIGD4Q8IY51 512 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 CMTM8Q8IZV2 173 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 NATD1Q8N6N6 113 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 PLA2G15Q8NCC3 412 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 ZNF461Q8TAF7 563 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDAC7-228ENST00000548938 FGF20Q9NP95 211 aaPredicted RBP12.96□□□□□ -0.33
HDAC7-228ENST00000548938 DIABLOQ9NR28 239 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 MAN2C1Q9NTJ4 1040 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 PLXND1Q9Y4D7 1925 aa12.96□□□□□ -0.33
HDAC7-228ENST00000548938 SGK494L7N484 410 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 GTPBP1O00178 669 aaKnown RBP12.96□□□□□ -0.34
HDAC7-228ENST00000548938 HMGN4O00479 90 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 FABP7O15540 132 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 PRODHO43272 600 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 ATG13O75143 517 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 URODP06132 367 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 CDK5Q00535 292 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 FAM205BPQ63HN1 556 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 ANKRD54Q6NXT1 300 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 METAP1DQ6UB28 335 aaPredicted RBP12.96□□□□□ -0.34
HDAC7-228ENST00000548938 KIF18BQ86Y91 864 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 SPERTQ8NA61 448 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 FIBINQ8TAL6 211 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 MYLIPQ8WY64 445 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 FOPNLQ96NB1 174 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 ARHGAP9Q9BRR9 750 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 RNF32Q9H0A6 362 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 SATB2Q9UPW6 733 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 ICKQ9UPZ9 632 aa12.96□□□□□ -0.34
HDAC7-228ENST00000548938 C2orf92A0A1B0GVN3 265 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 TRDV1A0A1B0GX56 115 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SLC28A2O43868 658 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CLTBP09497 229 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 HLA-FP30511 346 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 MTNR1AP48039 350 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SLC6A11P48066 632 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 AP2S1P53680 142 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms