RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 FAM20CQ8IXL6 584 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZNF740Q8NDX6 193 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 SIMC1Q8NDZ2 872 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 RFT1Q96AA3 541 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 TRIM43Q96BQ3 446 aaPredicted RBP9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 EID2BQ96D98 161 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 ECHDC3Q96DC8 303 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 C12orf66Q96MD2 445 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 IFT27Q9BW83 186 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 GABARAPL3Q9BY60 117 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 ACER3Q9NUN7 267 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 DUX4Q9UBX2 424 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 TMEM98Q9Y2Y6 226 aa9.01□□□□□ -0.97
CALCOCO1-210ENST00000548263 PCP4L1A6NKN8 68 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZNF670-ZNF695F2Z2N8 137 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 SMLR1H3BR10 107 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 MID1O15344 667 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 CSO75390 466 aaKnown RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZNF821O75541 412 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 HMGN1P05114 100 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 RPS5P46782 204 aaKnown RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 CCR8P51685 355 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 FGFBP1Q14512 234 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 SLC9A5Q14940 896 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ANKRD54Q6NXT1 300 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 PSRC1Q6PGN9 363 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 NXPE4Q6UWF7 544 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 PIAS4Q8N2W9 510 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 OR52P1PQ8NH57 321 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 PUM2Q8TB72 1066 aaKnown RBP eCLIP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 CXorf40BQ96DE9 158 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 DPCDQ9BVM2 203 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 RDH8Q9NYR8 311 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 CNIH4Q9P003 139 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 FEZF1A0PJY2 475 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ERI3O43414 337 aaKnown RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 NCR1O76036 304 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 TIMP1P01033 207 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 IL1AP01583 271 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 RLN1P04808 185 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ARAFP10398 606 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 STAT5AP42229 794 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ST3GAL3Q11203 375 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 MLLT11Q13015 90 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 RAB33AQ14088 237 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 RASSF6Q6ZTQ3 369 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 IKBIPQ70UQ0 350 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 LINC00471Q8N535 108 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 FAM98AQ8NCA5 519 aaKnown RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ANKK1Q8NFD2 765 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 OR5D16Q8NGK9 328 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZNF480Q8WV37 535 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 C7orf34Q96L11 122 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 KLHL42Q9P2K6 505 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 FBXO10Q9UK96 956 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 CCL27Q9Y4X3 112 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 WDR81Q562E7 1941 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 SLC31A1O15431 190 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 HOXC11O43248 304 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 IFNA7P01567 189 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 HLA-FP30511 346 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZNF33BQ06732 778 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 EIF4EBP2Q13542 120 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 NTRK2Q16620 822 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 LAIR1Q6GTX8 287 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 SLC30A6Q6NXT4 461 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 PODNL1Q6PEZ8 512 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 HORMAD2Q8N7B1 307 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 HYLS1Q96M11 299 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 GON7Q9BXV9 100 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 TTYH1Q9H313 450 aaPredicted RBP9□□□□□ -0.97
CALCOCO1-210ENST00000548263 NPAP1Q9NZP6 1156 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 ALG5Q9Y673 324 aa9□□□□□ -0.97
CALCOCO1-210ENST00000548263 LOC105369274A0A096LPK9 316 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 H0YIV9 168 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 HCN1O60741 890 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 ACADMP11310 421 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 DDOSTP39656 456 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 TRAM2Q15035 370 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 GPR68Q15743 365 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 SYPL1Q16563 259 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 FXNQ16595 210 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 WDR45BQ5MNZ6 344 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZNF362Q5T0B9 420 aaPredicted RBP8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 B3GLCTQ6Y288 498 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 LINGO2Q7L985 606 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 RBM45Q8IUH3 476 aaKnown RBP8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 PHC2Q8IXK0 858 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 OR4N4Q8N0Y3 316 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 GJD3Q8N144 294 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 DNAJC5GQ8N7S2 189 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 OR6F1Q8NGZ6 308 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 SLC38A5Q8WUX1 472 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 SNX33Q8WV41 574 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 APH1BQ8WW43 257 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 OR8D1Q8WZ84 308 aa8.99□□□□□ -0.97
CALCOCO1-210ENST00000548263 VN1R3Q9BXE9 311 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms