RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 SLC12A4Q9UP95 1085 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 PCDHGB3Q9Y5G1 929 aa18.62■□□□□ 0.57
SSH1-207ENST00000547862 MPDZO75970 2070 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 ANKRD33BA6NCL7 494 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 C2orf72A6NCS6 295 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 ERAL1O75616 437 aaKnown RBP18.61■□□□□ 0.57
SSH1-207ENST00000547862 SNX4O95219 450 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 HPNP05981 417 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 BMP7P18075 431 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 TSPAN8P19075 237 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 DNASE1P24855 282 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 CNTFP26441 200 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 PHBP35232 272 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 FEN1P39748 380 aaKnown RBP18.61■□□□□ 0.57
SSH1-207ENST00000547862 MAPK12P53778 367 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 GUCY2DQ02846 1103 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 FUT7Q11130 342 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 FAM180BQ6P0A1 224 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 FAM111BQ6SJ93 734 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 PAGE2Q7Z2X7 111 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 CDC20BQ86Y33 519 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 VWA5B2Q8N398 1253 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 CHDHQ8NE62 594 aaPredicted RBP18.61■□□□□ 0.57
SSH1-207ENST00000547862 RDH11Q8TC12 318 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 PRDM14Q9GZV8 571 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 UBQLN3Q9H347 655 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 NINJ2Q9NZG7 142 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 PCTPQ9UKL6 214 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 MAPRE3Q9UPY8 281 aa18.61■□□□□ 0.57
SSH1-207ENST00000547862 CCDC189A1A4V9 331 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 SYT5O00445 386 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 SMIM24O75264 130 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 PORP16435 677 aaPredicted RBP18.6■□□□□ 0.57
SSH1-207ENST00000547862 CEACAM8P31997 349 aaPredicted RBP18.6■□□□□ 0.57
SSH1-207ENST00000547862 DEKP35659 375 aaKnown RBP18.6■□□□□ 0.57
SSH1-207ENST00000547862 ALDH9A1P49189 494 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 DGKQP52824 942 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 PLCXD2Q0VAA5 305 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 COMMD6Q7Z4G1 85 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 TGIF2LYQ8IUE0 185 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 FAM83FQ8NEG4 500 aaPredicted RBP18.6■□□□□ 0.57
SSH1-207ENST00000547862 ADCY4Q8NFM4 1077 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 OR4F6Q8NGB9 312 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 OR1J4Q8NGS1 313 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 ABTB1Q969K4 478 aaPredicted RBP18.6■□□□□ 0.57
SSH1-207ENST00000547862 KLHL29Q96CT2 875 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 OMA1Q96E52 524 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 HBEGFQ99075 208 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 TMUB1Q9BVT8 246 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 OSBPL11Q9BXB4 747 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 ELOVL6Q9H5J4 265 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 ZBTB26Q9HCK0 441 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 GALNT9Q9HCQ5 603 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 FARSBQ9NSD9 589 aaKnown RBP18.6■□□□□ 0.57
SSH1-207ENST00000547862 AHSPQ9NZD4 102 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 KLRF1Q9NZS2 232 aa18.6■□□□□ 0.57
SSH1-207ENST00000547862 PPM1BO75688 479 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 INHBAP08476 426 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 KLK2P20151 261 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 TCEA1P23193 301 aaKnown RBP18.59■□□□□ 0.57
SSH1-207ENST00000547862 PTPN6P29350 595 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 PEX19P40855 299 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 LTB4RQ15722 352 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 NSUN5P2Q63ZY6 315 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 VASNQ6EMK4 673 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 MILR1Q7Z6M3 343 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 SIMC1Q8NDZ2 872 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 OR7G1Q8NGA0 311 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 FAM222BQ8WU58 562 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 TMEM41AQ96HV5 264 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 NODALQ96S42 347 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 SECISBP2Q96T21 854 aaKnown RBP18.59■□□□□ 0.57
SSH1-207ENST00000547862 ACSS3Q9H6R3 686 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 SERHLQ9NQF3 203 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 PFDN4Q9NQP4 134 aa18.59■□□□□ 0.57
SSH1-207ENST00000547862 ABCA4P78363 2273 aa18.58■□□□□ 0.57
SSH1-207ENST00000547862 A0A1B0GTL3 188 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 TUBAL3A6NHL2 446 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 GOLGA6L10A6NI86 522 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 ABCB1P08183 1280 aaPredicted RBP18.58■□□□□ 0.56
SSH1-207ENST00000547862 RBP1P09455 135 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 TIMP3P35625 211 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 NAGLUP54802 743 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 SRYQ05066 204 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 DUSP2Q05923 314 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 RCAN2Q14206 197 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 POU4F3Q15319 338 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 SLC48A1Q6P1K1 146 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 POMZP3Q6PJE2 187 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 PLXDC2Q6UX71 529 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 METTL4Q8N3J2 472 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 C9orf106Q8NAJ2 232 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 LINC01560Q8TB33 94 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 SELENOMQ8WWX9 145 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 WDYHV1Q96HA8 205 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 CXXC4Q9H2H0 198 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 ZDHHC18Q9NUE0 388 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 RYDENQ9NUL5 291 aaKnown RBP18.58■□□□□ 0.56
SSH1-207ENST00000547862 PSD3Q9NYI0 1048 aa18.58■□□□□ 0.56
SSH1-207ENST00000547862 MAT2BQ9NZL9 334 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms