RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LRTM1Q9HBL6 345 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 PLSCR2Q9NRY7 297 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 C1orf109Q9NX04 203 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 PLEKHB1Q9UF11 243 aaPredicted RBP14.65□□□□□ -0.06
DDX54-204ENST00000546898 PRODH2Q9UF12 536 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 BCAP29Q9UHQ4 241 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 TMED5Q9Y3A6 229 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 FIS1Q9Y3D6 152 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 DNAJC15Q9Y5T4 150 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 ACTL7BQ9Y614 415 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 NCOA6Q14686 2063 aaPredicted RBP14.65□□□□□ -0.06
DDX54-204ENST00000546898 PCNX1Q96RV3 2341 aa14.65□□□□□ -0.06
DDX54-204ENST00000546898 A0A0G2JMM0 328 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 A0A1W2PPB8 328 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 A0A1W2PRS3 328 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 PINLYPA6NC86 204 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 KIR3DP1A8MWS1 328 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TM9SF1O15321 606 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 ERLIN1O75477 346 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 GLSO94925 669 aaPredicted RBP14.64□□□□□ -0.07
DDX54-204ENST00000546898 ABOP16442 354 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 MPIP34949 423 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 SOX18P35713 384 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 DCAF7P61962 342 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 RPP38P78345 283 aaKnown RBP14.64□□□□□ -0.07
DDX54-204ENST00000546898 EXOSC7Q15024 291 aaKnown RBP14.64□□□□□ -0.07
DDX54-204ENST00000546898 KIAA0040Q15053 153 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 LTB4RQ15722 352 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 HYAL4Q2M3T9 481 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TNFAIP8L3Q5GJ75 292 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TBCELQ5QJ74 424 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 FAM180BQ6P0A1 224 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 PAOXQ6QHF9 649 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 Q6ZSR9 355 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 ZCCHC23Q6ZST2 131 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TICAM1Q8IUC6 712 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 CCDC116Q8IYX3 515 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 FAM9CQ8IZT9 166 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 FAM13CQ8NE31 585 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 ADCY4Q8NFM4 1077 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 OR10G3Q8NGC4 313 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 OR6Y1Q8NGX8 325 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TWIST2Q8WVJ9 160 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 HSPBAP1Q96EW2 488 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 ZNF764Q96H86 408 aaPredicted RBP14.64□□□□□ -0.07
DDX54-204ENST00000546898 SECISBP2Q96T21 854 aaKnown RBP14.64□□□□□ -0.07
DDX54-204ENST00000546898 ITPAQ9BY32 194 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TUBB1Q9H4B7 451 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 ZDHHC11Q9H8X9 412 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TAS2R7Q9NYW3 318 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 TRAF6Q9Y4K3 522 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 NPFFR2Q9Y5X5 522 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 PTGDR2Q9Y5Y4 395 aa14.64□□□□□ -0.07
DDX54-204ENST00000546898 CHCHD2Q9Y6H1 151 aaPredicted RBP14.64□□□□□ -0.07
DDX54-204ENST00000546898 NCKAP5O14513 1909 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 G3V3Y1 287 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 ACOX3O15254 700 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 MYZAPP0CAP1 466 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 PCSK2P16519 638 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 NAGAP17050 411 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 PTGER1P34995 402 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 SERPINB4P48594 390 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 DNASE1L1P49184 302 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 PPIAP62937 165 aaKnown RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 PSPHP78330 225 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 MRPS35P82673 323 aaKnown RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 HSF1Q00613 529 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 FOXO1Q12778 655 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 DUSP8Q13202 625 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 C3AR1Q16581 482 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 TRMT12Q53H54 448 aaKnown RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 SH2D4BQ5SQS7 431 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 ARHGAP11AQ6P4F7 1023 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 MAMDC2Q7Z304 686 aaPredicted RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 EXOC3L1Q86VI1 746 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 CHERPQ8IWX8 916 aaKnown RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 DDIASQ8IXT1 998 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 EID3Q8N140 333 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 FAM109AQ8N4B1 249 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 OR52R1Q8NGF1 315 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 OR9A2Q8NGT5 310 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 OR2T11Q8NH01 316 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 PGM2Q96G03 612 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 LCORQ96JN0 433 aaPredicted RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 BBS4Q96RK4 519 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 CCT7Q99832 543 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 STMN4Q9H169 189 aaPredicted RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 NXF5Q9H1B4 397 aaKnown RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 CENPHQ9H3R5 247 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 TUBA8Q9NY65 449 aaPredicted RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 BOKQ9UMX3 212 aaPredicted RBP14.63□□□□□ -0.07
DDX54-204ENST00000546898 DTX4Q9Y2E6 619 aa14.63□□□□□ -0.07
DDX54-204ENST00000546898 NBPF19A0A087WUL8 3843 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 ANKRD33BA6NCL7 494 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 FAM166BA8MTA8 275 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 MYO1GB0I1T2 1018 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 TMEM233B4DJY2 109 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 CCL21O00585 134 aa14.62□□□□□ -0.07
DDX54-204ENST00000546898 PRRG2O14669 202 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms