RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NELL2Q99435 816 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 RBM4BQ9BQ04 359 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 RBM4Q9BWF3 364 aaKnown RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 PAK1IP1Q9NWT1 392 aaPredicted RBP11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SELENONQ9NZV5 590 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 RNF215Q9Y6U7 377 aa11.23□□□□□ -0.61
CCDC38-202ENST00000546386 SDK2Q58EX2 2172 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 A0A0J9YY10 115 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 K7ESF4 209 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 BCKDKO14874 412 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 BCAT2O15382 392 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 KCNJ13O60928 360 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 MFN2O95140 757 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 EPPINO95925 133 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 PROS1P07225 676 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 GKN3PP0CG01 181 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 MAGEA2P43356 314 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 BLKP51451 505 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 C21orf59P57076 290 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 STARD6P59095 220 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 RACK1P63244 317 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 DGCR6Q14129 220 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 FAAH2Q6GMR7 532 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 ZAR1Q86SH2 424 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 PATL1Q86TB9 770 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF555Q8NEP9 628 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 PHF10Q8WUB8 498 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 PIGKQ92643 395 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 GAL3ST3Q96A11 431 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 MTERF3Q96E29 417 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 SLC35A4Q96G79 324 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 AHCYL2Q96HN2 611 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 C10orf90Q96M02 699 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF300Q96RE9 604 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 POLR1BQ9H9Y6 1135 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 NEUROD4Q9HD90 331 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 ANGPT4Q9Y264 503 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 DTX4Q9Y2E6 619 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 LRP4O75096 1905 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 CPSF4LA6NMK7 179 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 RHPN2P1A8MT19 583 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 KDM1AO60341 852 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 SEMG1P04279 462 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 CFIP05156 583 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 NME1P15531 152 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 SSTR4P31391 388 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 DNAJA1P31689 397 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 RPL3P39023 403 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 MAP2K4P45985 399 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 RPP38P78345 283 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 TEAD4Q15561 434 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 SHQ1Q6PI26 577 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 TTLL10Q6ZVT0 673 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 C8orf59Q8N0T1 100 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 TAGAPQ8N103 731 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 C19orf47Q8N9M1 422 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 GOLM1Q8NBJ4 401 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 PIK3C3Q8NEB9 887 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 OR4K14Q8NGD5 310 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 LZICQ8WZA0 190 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 NMNAT1Q9HAN9 279 aaPredicted RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 ACER3Q9NUN7 267 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 DNAAF2Q9NVR5 837 aaKnown RBP11.22□□□□□ -0.61
CCDC38-202ENST00000546386 WNT16Q9UBV4 365 aa11.22□□□□□ -0.61
CCDC38-202ENST00000546386 KIR2DS5A0A0G2JLQ3 304 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 A0A0G2JNG1 304 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 KIR2DS3K7RE56 304 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 PEX12O00623 359 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 GNB5O14775 395 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 VILLO15195 856 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 CHST10O43529 356 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 GADD45GO95257 159 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 IGLV3-19P01714 112 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 DRD2P14416 443 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 MLLT10P55197 1068 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 PCBP3P57721 371 aaKnown RBP11.21□□□□□ -0.61
CCDC38-202ENST00000546386 LSM3P62310 102 aaKnown RBP11.21□□□□□ -0.61
CCDC38-202ENST00000546386 CFHR1Q03591 330 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 MAP4K2Q12851 820 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 KIR2DS5Q14953 304 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 DUSP5Q16690 384 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 ZNF630Q2M218 657 aaPredicted RBP11.21□□□□□ -0.61
CCDC38-202ENST00000546386 C10orf62Q5T681 223 aaPredicted RBP11.21□□□□□ -0.61
CCDC38-202ENST00000546386 GPR107Q5VW38 600 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 TCTN3Q6NUS6 607 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 C16orf62Q7Z3J2 963 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 TMPRSS9Q7Z410 1059 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 IQCF1Q8N6M8 205 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 AQP11Q8NBQ7 271 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 OR10G2Q8NGC3 310 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 PROX1Q92786 737 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 TM4SF19Q96DZ7 209 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 IL4I1Q96RQ9 567 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 LMF1Q96S06 567 aa11.21□□□□□ -0.61
CCDC38-202ENST00000546386 NUDT22Q9BRQ3 303 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms