RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SNAPC1Q16533 368 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 SPDYE7PQ495Y7 208 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 KHDRBS2Q5VWX1 349 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 ASTLQ6HA08 431 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 ACSM5Q6NUN0 579 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 SLC27A4Q6P1M0 643 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 ZER1Q7Z7L7 766 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 FAM129CQ86XR2 697 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 MMP21Q8N119 569 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 GJD3Q8N144 294 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 CADM2Q8N3J6 435 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 SYT14Q8NB59 555 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 BBS10Q8TAM1 723 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 TEX47Q8TBZ9 253 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 CREB3L1Q96BA8 519 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 LRIG1Q96JA1 1093 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 SLC38A2Q96QD8 506 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 ATF6BQ99941 703 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 BEX2Q9BXY8 128 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 ZNF717Q9BY31 904 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 MVB12BQ9H7P6 319 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 TRIM45Q9H8W5 580 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 BCL2L10Q9HD36 194 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 MRPL39Q9NYK5 338 aaKnown RBP8.27□□□□□ -1.09
TDP1-204ENST00000545686 STMN3Q9NZ72 180 aa8.27□□□□□ -1.09
TDP1-204ENST00000545686 A0A0G2JMP0 313 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CASC3O15234 703 aaKnown RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 AKAP8O43823 692 aaKnown RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 LILRB5O75023 590 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 LEFTY1O75610 366 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 UBXN7O94888 489 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 HLA-DPB1P04440 258 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 EPHX1P07099 455 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ELFN1P0C7U0 828 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 LIMS3P0CW19 117 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 LIMS4P0CW20 117 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 XPAP23025 273 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 SSTR4P31391 388 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 IFNGR2P38484 337 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 BTG1P62324 171 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 MEF2AQ02078 507 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 PIN1Q13526 163 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 ANGPT1Q15389 498 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 WSCD2Q2TBF2 565 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ZNF805Q5CZA5 627 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CCNJQ5T5M9 372 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 OR2G6Q5TZ20 316 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 IQCHQ86VS3 1027 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 TMC8Q8IU68 726 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ADGRF3Q8IZF5 1079 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 FAM109AQ8N4B1 249 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ARIH2OSQ8N7S6 290 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 POGLUT1Q8NBL1 392 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 TMEM145Q8NBT3 493 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 DEDD2Q8WXF8 326 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ACOT12Q8WYK0 555 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 RAB8BQ92930 207 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 RFKQ969G6 155 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 TM4SF18Q96CE8 201 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 SLC35G5Q96KT7 338 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 LINC00615Q96LM1 132 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 MS4A8Q9BY19 250 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 DPEP2Q9H4A9 486 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 NT5DC2Q9H857 520 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 PELI2Q9HAT8 420 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 COMMD3Q9UBI1 195 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CARD8Q9Y2G2 431 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 YARS2Q9Y2Z4 477 aaKnown RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 C17orf113A0A1B0GUU1 675 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 HPGDSO60760 199 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 B4GALT2O60909 372 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CRYZL1O95825 349 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ARSBP15848 533 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 BSGP35613 385 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 KHKP50053 298 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ANXA11P50995 505 aaKnown RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 ABATP80404 500 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ADAM15Q13444 863 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 IL18Q14116 193 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 GNA13Q14344 377 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 BICRALQ6AI39 1079 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 SIGIRRQ6IA17 410 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 PAMR1Q6UXH9 720 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 LIPIQ6XZB0 460 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ZNF782Q6ZMW2 699 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 TRILQ7L0X0 811 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CFAP206Q8IYR0 622 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ZNF740Q8NDX6 193 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 GNPDA2Q8TDQ7 276 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 GATAD2BQ8WXI9 593 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 AKAP1Q92667 903 aaKnown RBP eCLIP8.26□□□□□ -1.09
TDP1-204ENST00000545686 MARVELD3Q96A59 401 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 UPRTQ96BW1 309 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ZNF514Q96K75 400 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 HYLS1Q96M11 299 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CAMK1GQ96NX5 476 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 UBL7Q96S82 380 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 TM9SF2Q99805 663 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms