RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FRA10AC1Q70Z53 315 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 NUP54Q7Z3B4 507 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 PDPRQ8NCN5 879 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 CAVIN3Q969G5 261 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 ESAMQ96AP7 390 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 RGMAQ96B86 450 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 KRT12Q99456 494 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 SORBS1Q9BX66 1292 aaKnown RBP13.34□□□□□ -0.27
RTN3-214ENST00000545432 MOCS1Q9NZB8 636 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 ADGRE2Q9UHX3 823 aa13.34□□□□□ -0.27
RTN3-214ENST00000545432 A0A0A6YYD5 115 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 A0A1W2PR48 441 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 FRG2CA6NGY1 282 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 NCF1BA6NI72 391 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 NCF1CA8MVU1 366 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 H0Y3Z8 333 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 PLOD2O00469 737 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 DNALI1O14645 258 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 KLF4O43474 513 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 PRKRAO75569 313 aaKnown RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 PPM1BO75688 479 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 IFNA2P01563 188 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 THBS1P07996 1170 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 NCF1P14598 390 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 IVDP26440 423 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 GCKP35557 465 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 BUD31P41223 144 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 PIK3CBP42338 1070 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 KIR2DL2P43627 348 aaPredicted RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 NRG3P56975 720 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 FBXO48Q5FWF7 155 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 MED27Q6P2C8 311 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 ANGPTL8Q6UXH0 198 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 BTLAQ7Z6A9 289 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 TRIM58Q8NG06 486 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 NODALQ96S42 347 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 PIGQQ9BRB3 760 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 CD244Q9BZW8 370 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 OR10A5Q9H207 317 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 OR51B5Q9H339 312 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 DDX31Q9H8H2 851 aaKnown RBP13.33□□□□□ -0.28
RTN3-214ENST00000545432 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 TEX264Q9Y6I9 313 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 ANK2Q01484 3957 aa13.33□□□□□ -0.28
RTN3-214ENST00000545432 C16orf97H3BN30 126 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 TMPRSS11DO60235 418 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 OR10H2O60403 315 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 CT62P0C5K7 136 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 CD8BP10966 210 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 GPX3P22352 226 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 BSGP35613 385 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 FNTAP49354 379 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 STARP49675 285 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 DMTNQ08495 405 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
RTN3-214ENST00000545432 TOMM20Q15388 145 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 GUSBP1Q15486 140 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 VWA1Q6PCB0 445 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 LRRC70Q7Z2Q7 622 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 ZNF611Q8N823 705 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 OR7G1Q8NGA0 311 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 TMEM204Q9BSN7 226 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 MED18Q9BUE0 208 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 NXF5Q9H1B4 397 aaKnown RBP13.32□□□□□ -0.28
RTN3-214ENST00000545432 ACTR8Q9H981 624 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 PPANQ9NQ55 473 aaKnown RBP13.32□□□□□ -0.28
RTN3-214ENST00000545432 LYARQ9NX58 379 aaKnown RBP13.32□□□□□ -0.28
RTN3-214ENST00000545432 HEATR5AQ86XA9 2040 aa13.32□□□□□ -0.28
RTN3-214ENST00000545432 A0A1W2PS29 197 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 OVOL3O00110 214 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 SAP18O00422 153 aaKnown RBP13.31□□□□□ -0.28
RTN3-214ENST00000545432 EMC8O43402 210 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 ZIC3O60481 467 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 CD1DP15813 335 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 SRD5A2P31213 254 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 CPOXP36551 454 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 ELK3P41970 407 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 RPS13P62277 151 aaKnown RBP13.31□□□□□ -0.28
RTN3-214ENST00000545432 SRYQ05066 204 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 HLA-DQA1Q5Y7H0 255 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 DESI1Q6ICB0 168 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 DNM1P46Q6ZS02 220 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 GRAMD2AQ8IUY3 354 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 HUS1BQ8NHY5 278 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 RNF138Q8WVD3 245 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 TMEM171Q8WVE6 324 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 PGM2Q96G03 612 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 UBXN10Q96LJ8 280 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 SLC39A3Q9BRY0 314 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 OSBPL11Q9BXB4 747 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 CXorf56Q9H5V9 222 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 SERHLQ9NQF3 203 aa13.31□□□□□ -0.28
RTN3-214ENST00000545432 DTX4Q9Y2E6 619 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms