RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RBBP4Q09028 425 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 PIN1Q13526 163 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 NNATQ16517 81 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 WDR45BQ5MNZ6 344 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 MLIPQ5VWP3 458 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 PRSS58Q8IYP2 241 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 ST13P4Q8IZP2 240 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 SLC5A8Q8N695 610 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 TTC29Q8NA56 475 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 CNIH3Q8TBE1 160 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 GTPBP3Q969Y2 492 aaKnown RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 MMABQ96EY8 250 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 RMND5BQ96G75 393 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF300Q96RE9 604 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 FEVQ99581 238 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 NIPSNAP1Q9BPW8 284 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 RBM4BQ9BQ04 359 aaKnown RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 RBM4Q9BWF3 364 aaKnown RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 BATF3Q9NR55 127 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 SEMA3GQ9NS98 782 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 KIF17Q9P2E2 1029 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 CFAP47Q6ZTR5 3102 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 URADA6NGE7 173 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 H3BNH8 94 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 EMC8O43402 210 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 CLPTM1O96005 669 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 TLX1P31314 330 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 DNAJA1P31689 397 aaKnown RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 TSFMP43897 325 aaKnown RBP12.82□□□□□ -0.36
HCFC2-202ENST00000544223 SLC13A2Q13183 592 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 RAPSNQ13702 412 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 MLC1Q15049 377 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 CCDC80Q76M96 950 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 ZFP28Q8NHY6 868 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 SYNDIG1Q9H7V2 258 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 ANKHQ9HCJ1 492 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 P2RX2Q9UBL9 471 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 PSME2Q9UL46 239 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 SLC6A14Q9UN76 642 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 PADI2Q9Y2J8 665 aa12.82□□□□□ -0.36
HCFC2-202ENST00000544223 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 TRBV4-1A0A0J9YWV2 114 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 HYAL3O43820 417 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 PORP16435 677 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 DUSP5Q16690 384 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 KLHL17Q6TDP4 642 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 SVOPLQ8N434 492 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 TSPAN14Q8NG11 270 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 LZICQ8WZA0 190 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 ANKRD9Q96BM1 317 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 YIPF3Q9GZM5 350 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 ADNPQ9H2P0 1102 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 RASSF1Q9NS23 344 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 PNPLA3Q9NST1 481 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 GIN1Q9NXP7 522 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 NDOR1Q9UHB4 597 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 PHF11Q9UIL8 331 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 MYRFQ9Y2G1 1151 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 KLK4Q9Y5K2 254 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 LOC100130705A0A1B0GUX0 176 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 GDF9O60383 454 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 IGFBP1P08833 259 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 FOLR1P15328 257 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 CTSKP43235 329 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 MAN2A2P49641 1150 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 CLK3P49761 638 aaKnown RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
HCFC2-202ENST00000544223 LAIR1Q6GTX8 287 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 TTLL10Q6ZVT0 673 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 USP51Q70EK9 711 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 CLIP3Q96DZ5 547 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 RAD21L1Q9H4I0 556 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 ACER3Q9NUN7 267 aa12.81□□□□□ -0.36
HCFC2-202ENST00000544223 HYKKA2RU49 373 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 TMEM150CB9EJG8 249 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 FPR1P21462 350 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 GABRA4P48169 554 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 TPD52P55327 224 aaPredicted RBP12.8□□□□□ -0.36
HCFC2-202ENST00000544223 PRR5P85299 388 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 SEC23BQ15437 767 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 CEBPEQ15744 281 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 NADK2Q4G0N4 442 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 C1orf189Q5VU69 101 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 LAIR2Q6ISS4 152 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 GUSBP11Q6P575 273 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 FIGNL1Q6PIW4 674 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 OGFOD3Q6PK18 319 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 HIPK1Q86Z02 1210 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 APOBEC4Q8WW27 367 aaKnown RBP12.8□□□□□ -0.36
HCFC2-202ENST00000544223 MESP1Q9BRJ9 268 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 KRT84Q9NSB2 600 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 DTX4Q9Y2E6 619 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 LOC400499M0QZD8 3231 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 XPNPEP2O43895 674 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms