RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 MINDY4Q4G0A6 757 aa17.29■□□□□ 0.36
CCT4-204ENST00000544079 HECTD3Q5T447 861 aa17.29■□□□□ 0.36
CCT4-204ENST00000544079 PRAMEF9Q5VWM5 478 aa17.29■□□□□ 0.36
CCT4-204ENST00000544079 GPC2Q8N158 579 aa17.29■□□□□ 0.36
CCT4-204ENST00000544079 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
CCT4-204ENST00000544079 OR2T35Q8NGX2 323 aa17.29■□□□□ 0.36
CCT4-204ENST00000544079 ZNF624Q9P2J8 865 aaPredicted RBP17.29■□□□□ 0.36
CCT4-204ENST00000544079 ING1Q9UK53 422 aaPredicted RBP17.29■□□□□ 0.36
CCT4-204ENST00000544079 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 MTMR11A4FU01 709 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 FAM227AF5H4B4 570 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 F5H5T6 163 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 EFCAB14O75071 495 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 NCR1O76036 304 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 LIMS3P0CW19 117 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 LIMS4P0CW20 117 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 DRD2P14416 443 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 NPR2P20594 1047 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 AFF1P51825 1210 aaKnown RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 RAE1P78406 368 aaKnown RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 CHIT1Q13231 466 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 CYP27C1Q4G0S4 372 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 B3GNTL1Q67FW5 361 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 RASSF6Q6ZTQ3 369 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 LINC00471Q8N535 108 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 OR56B4Q8NH76 319 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 ATOH1Q92858 354 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 RNFT2Q96EX2 444 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 MYEOVQ96EZ4 313 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 LCORQ96JN0 433 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 SFXN2Q96NB2 322 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 NPAS1Q99742 590 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 FUZQ9BT04 418 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 SERHL2Q9H4I8 314 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 ASB8Q9H765 288 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 MARCH2Q9P0N8 246 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 CLCA2Q9UQC9 943 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 ZNF106Q9H2Y7 1883 aaKnown RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 LOC105369274A0A096LPK9 316 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 SHISA3A0PJX4 238 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 MPTX1A8MV57 137 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 FAM25EA8MYX2 175 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 AIPO00170 330 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 GMDSO60547 372 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 H1F0P07305 194 aaKnown RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 NMBP08949 121 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 ANXA4P09525 319 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 HIST1H2AGP0C0S8 130 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 TYMPP19971 482 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 HIST1H2ADP20671 130 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 DGKEP52429 567 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 VSX2P58304 361 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 PUM1Q14671 1186 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCT4-204ENST00000544079 NCEH1Q6PIU2 408 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 SLC36A4Q6YBV0 504 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 ZNF852Q6ZMS4 543 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 UBE2R2Q712K3 238 aaPredicted RBP17.28■□□□□ 0.36
CCT4-204ENST00000544079 NLRC3Q7RTR2 1065 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 SCN4BQ8IWT1 228 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 OR4N4Q8N0Y3 316 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 BVESQ8NE79 360 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 HASPINQ8TF76 798 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 HIST1H2AJQ99878 128 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 PAAF1Q9BRP4 392 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 PRKAG2Q9UGJ0 569 aa17.28■□□□□ 0.36
CCT4-204ENST00000544079 MGAT4DA6NG13 374 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 ARL5CA6NH57 179 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 F2P00734 622 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 HBA1P69905 142 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 CDK5Q00535 292 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 RPL6Q02878 288 aaKnown RBP17.27■□□□□ 0.36
CCT4-204ENST00000544079 GNA13Q14344 377 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 GPR33Q49SQ1 333 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 MPPE1Q53F39 396 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 FAM151BQ6UXP7 276 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 KRT74Q7RTS7 529 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 ZNF467Q7Z7K2 595 aaPredicted RBP17.27■□□□□ 0.36
CCT4-204ENST00000544079 LRRC56Q8IYG6 542 aaPredicted RBP17.27■□□□□ 0.36
CCT4-204ENST00000544079 EID2BQ96D98 161 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 PKP4Q99569 1192 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 CACNG6Q9BXT2 260 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 TMPRSS13Q9BYE2 586 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 HPF1Q9NWY4 346 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 ACAD8Q9UKU7 415 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 PPIEQ9UNP9 301 aaKnown RBP17.27■□□□□ 0.36
CCT4-204ENST00000544079 KIAA1671Q9BY89 1806 aa17.27■□□□□ 0.36
CCT4-204ENST00000544079 ANKDD1BA6NHY2 528 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 UPK3BL1B0FP48 263 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 UPK3BL2E5RIL1 263 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 SLC16A5O15375 505 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 EEF1E1O43324 174 aaKnown RBP17.27■□□□□ 0.35
CCT4-204ENST00000544079 SSNA1O43805 119 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 PRAF2O60831 178 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 GIPRP48546 466 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 CDH4P55283 916 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 ZP1P60852 638 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 SP140Q13342 867 aa17.27■□□□□ 0.35
CCT4-204ENST00000544079 ETFDHQ16134 617 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms