RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PIGWQ7Z7B1 504 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 RPS19BP1Q86WX3 136 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FUNDC1Q8IVP5 155 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CPSF7Q8N684 471 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF615Q8N8J6 731 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR8K3Q8NH51 312 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C16orf52Q8NHV5 167 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PSMF1Q92530 271 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 VPS33AQ96AX1 596 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF354BQ96LW1 612 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PANX1Q96RD7 426 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CDCP1Q9H5V8 836 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF552Q9H707 407 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LIN28AQ9H9Z2 209 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SAR1AQ9NR31 198 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TAS2R9Q9NYW1 312 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRODH2Q9UF12 536 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 BTNL2Q9UIR0 455 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C19orf53Q9UNZ5 99 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NUP214P35658 2090 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LOC400499M0QZD8 3231 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 UPK1AO00322 258 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SCN2BO60939 215 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FAM87AP0C7U9 286 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MEP1AQ16819 746 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 VPS26BQ4G0F5 336 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ACER2Q5QJU3 275 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FHL5Q5TD97 284 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 GKAP1Q5VSY0 366 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TCTN3Q6NUS6 607 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ISLR2Q6UXK2 745 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 GK5Q6ZS86 529 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR2L13Q8N349 312 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NUP43Q8NFH3 380 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TTC9Q92623 222 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NMUR2Q9GZQ4 415 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 WWTR1Q9GZV5 400 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CXorf36Q9H7Y0 433 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 EQTNQ9NQ60 294 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SIRT3Q9NTG7 399 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZCCHC3Q9NUD5 404 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 STMN3Q9NZ72 180 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ABI3Q9P2A4 366 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ARL2BPQ9Y2Y0 163 aa13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PCDHGA9Q9Y5G4 932 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CPAMD8Q8IZJ3 1885 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 WWP2O00308 870 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FCHO1O14526 889 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 EMC8O43402 210 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NME6O75414 186 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ANP32DO95626 131 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 IFI6P09912 130 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CCT3P49368 545 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 EMDP50402 254 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF155Q12901 538 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 KLF10Q13118 480 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 DUSP8Q13202 625 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 KCNAB2Q13303 367 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 EBPQ15125 230 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C6orf10Q5SRN2 563 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 H3F3CQ6NXT2 135 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MSANTD1Q6ZTZ1 278 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MTDHQ86UE4 582 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR5AK3PQ8NH89 298 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PSMA8Q8TAA3 256 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NUBPLQ8TB37 319 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 FAM120BQ96EK7 910 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ABHD17AQ96GS6 310 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ITCHQ96J02 903 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CCDC115Q96NT0 180 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 INPP5KQ9BT40 448 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ARMCX1Q9P291 453 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MYOTQ9UBF9 498 aa13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 HEMK1Q9Y5R4 338 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TNRC6AQ8NDV7 1962 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 DYTNA2CJ06 578 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ERVH48-1M5A8F1 160 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 RFXANKO14593 260 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MAN1A2O60476 641 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ITGA10O75578 1167 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SNRPB2P08579 225 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ADSLP30566 484 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SOX11P35716 441 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MLF1P58340 268 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TP53BP2Q13625 1128 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 BHLHB9Q6PI77 547 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 DNAJC14Q6Y2X3 702 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C16orf47Q6ZP98 133 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TRIML2Q8N7C3 387 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MOAP1Q96BY2 351 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MS4A4EQ96PG1 132 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NPAS2Q99743 824 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ITPAQ9BY32 194 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ADNPQ9H2P0 1102 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms