RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PDCD5O14737 125 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CHRM5P08912 532 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PBX2P40425 430 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CTSCP53634 463 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 OR12D2P58182 307 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ARHGAP19Q14CB8 494 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 ABRAXAS2Q15018 415 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CTC1Q2NKJ3 1217 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 TPRG1LQ5T0D9 272 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 BICRALQ6AI39 1079 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 FIGNL1Q6PIW4 674 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 UNQ6126/PRO20091Q6UXV3 157 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 C6orf120Q7Z4R8 191 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 MCATQ8IVS2 390 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 NLGN4XQ8N0W4 816 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 POC5Q8NA72 575 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 AQP11Q8NBQ7 271 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 BBS1Q8NFJ9 593 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 HPS1Q92902 700 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 FUBP1Q96AE4 644 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 CHFRQ96EP1 664 aa6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 THAP10Q9P2Z0 257 aaPredicted RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 RSL24D1Q9UHA3 163 aaKnown RBP6.57□□□□□ -1.36
SRGAP1-206ENST00000543397 PPM1BO75688 479 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GATBO75879 557 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ADORA3P0DMS8 318 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 FPR1P21462 350 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GSTM2P28161 218 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 IL18Q14116 193 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 OR4D1Q15615 310 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ARSJQ5FYB0 599 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LRIF1Q5T3J3 769 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 NDUFAF5Q5TEU4 345 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 QSOX2Q6ZRP7 698 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF440Q8IYI8 595 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 UBALD2Q8IYN6 164 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ANKRD53Q8N9V6 530 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 MDGA1Q8NFP4 955 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 OR56B2PQ8NGI1 322 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LILRB1Q8NHL6 650 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 C1orf216Q8TAB5 229 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 BMFQ96LC9 184 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ORAI3Q9BRQ5 295 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ALOXE3Q9BYJ1 711 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 OR51I1Q9H343 314 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 KLHL31Q9H511 634 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 IFT46Q9NQC8 304 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GLS2Q9UI32 602 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CYTIPO60759 359 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 RDH16O75452 317 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ITGA10O75578 1167 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CXCL10P02778 98 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 DCNP07585 359 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 HTR2BP41595 481 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ATP4BP51164 291 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 TAS2R38P59533 333 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 TXNL4AP83876 142 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC14A2Q15849 920 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SSX2Q16385 188 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LIN52Q52LA3 116 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 RNASE12Q5GAN4 147 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 FAM205BPQ63HN1 556 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 NADSYN1Q6IA69 706 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GRHL2Q6ISB3 625 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 COMMD6Q7Z4G1 85 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PIGWQ7Z7B1 504 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PHTF2Q8N3S3 785 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 DENND6BQ8NEG7 585 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 S100ZQ8WXG8 99 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PTERQ96BW5 349 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 AURKBQ96GD4 344 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 MAPKAP1Q9BPZ7 522 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 WDR12Q9GZL7 423 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 IFT22Q9H7X7 185 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 RDH14Q9HBH5 336 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ABCB9Q9NP78 766 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 C14orf166Q9Y224 244 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 A0A096LPI6 279 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LOC110117498-PIK3R3F6TDL0 507 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 RRP8O43159 456 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 DIRAS1O95057 198 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 EGFP01133 1207 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 FGF3P11487 239 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 XCR1P46094 333 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 RGRP47804 291 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GPR143P51810 404 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PGGT1BP53609 377 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SQSTM1Q13501 440 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ARFRP1Q13795 201 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LACTB2Q53H82 288 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CDKL4Q5MAI5 379 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 DCAF12Q5T6F0 453 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LCTLQ6UWM7 567 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PIANPQ8IYJ0 282 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 KRTCAP2Q8N6L1 136 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CD200R1Q8TD46 325 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PHB2Q99623 299 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 BHLHE41Q9C0J9 482 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms