RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 FAM120BQ96EK7 910 aaKnown RBP19.33■□□□□ 0.69
OTUB1-211ENST00000543004 VMP1Q96GC9 406 aa19.33■□□□□ 0.69
OTUB1-211ENST00000543004 THOC3Q96J01 351 aaKnown RBP19.33■□□□□ 0.69
OTUB1-211ENST00000543004 MMP25Q9NPA2 562 aa19.33■□□□□ 0.69
OTUB1-211ENST00000543004 ATP13A2Q9NQ11 1180 aa19.33■□□□□ 0.69
OTUB1-211ENST00000543004 DDX18Q9NVP1 670 aaKnown RBP19.33■□□□□ 0.69
OTUB1-211ENST00000543004 NBEAQ8NFP9 2946 aa19.33■□□□□ 0.69
OTUB1-211ENST00000543004 PLOD3O60568 738 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 ADSLP30566 484 aaPredicted RBP19.33■□□□□ 0.68
OTUB1-211ENST00000543004 ST13P50502 369 aaKnown RBP19.33■□□□□ 0.68
OTUB1-211ENST00000543004 RNF111Q6ZNA4 994 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 WDR53Q7Z5U6 358 aaPredicted RBP19.33■□□□□ 0.68
OTUB1-211ENST00000543004 OR2L13Q8N349 312 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 CLEC1AQ8NC01 280 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 C16orf52Q8NHV5 167 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 COPS7AQ9UBW8 275 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 PCDHGB4Q9UN71 923 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 NDUFAF1Q9Y375 327 aa19.33■□□□□ 0.68
OTUB1-211ENST00000543004 RFXANKO14593 260 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 SLC22A2O15244 555 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 MAN1A2O60476 641 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 SERPINA7P05543 415 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 ITGA3P26006 1051 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 PTPN6P29350 595 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 EMDP50402 254 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 CCL11P51671 97 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 CLCN2P51788 898 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 AIMP2Q13155 320 aaKnown RBP19.32■□□□□ 0.68
OTUB1-211ENST00000543004 C19orf48Q6RUI8 117 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 ZNF621Q6ZSS3 439 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 MSANTD1Q6ZTZ1 278 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 KBTBD2Q8IY47 623 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 SIRT6Q8N6T7 355 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 BRIX1Q8TDN6 353 aaKnown RBP19.32■□□□□ 0.68
OTUB1-211ENST00000543004 PSMF1Q92530 271 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 ITCHQ96J02 903 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 ART5Q96L15 291 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 NPAS2Q99743 824 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 PAIP1Q9H074 479 aaKnown RBP19.32■□□□□ 0.68
OTUB1-211ENST00000543004 RMND5AQ9H871 391 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 NEUROD4Q9HD90 331 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 EQTNQ9NQ60 294 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 ZCCHC3Q9NUD5 404 aaKnown RBP19.32■□□□□ 0.68
OTUB1-211ENST00000543004 MRGBPQ9NV56 204 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 PTGFRNQ9P2B2 879 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 MAP10Q9P2G4 905 aa19.32■□□□□ 0.68
OTUB1-211ENST00000543004 C19orf53Q9UNZ5 99 aaPredicted RBP19.32■□□□□ 0.68
OTUB1-211ENST00000543004 A0A087WV62 115 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 TMEM200CA6NKL6 621 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 A8MUI8 341 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 ANGPT2O15123 496 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 COX4I1P13073 169 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 CCT3P49368 545 aaKnown RBP19.31■□□□□ 0.68
OTUB1-211ENST00000543004 RRADP55042 308 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 CASP9P55211 416 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 RNF4P78317 190 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 SPDYE7PQ495Y7 208 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 B3GNTL1Q67FW5 361 aaPredicted RBP19.31■□□□□ 0.68
OTUB1-211ENST00000543004 HSDL2Q6YN16 418 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 GALNT16Q8N428 558 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 NUP43Q8NFH3 380 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 GOT1L1Q8NHS2 421 aaPredicted RBP19.31■□□□□ 0.68
OTUB1-211ENST00000543004 OTUB1Q96FW1 271 aaPredicted RBP19.31■□□□□ 0.68
OTUB1-211ENST00000543004 SLC25A23Q9BV35 468 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 IL1RL2Q9HB29 575 aa19.31■□□□□ 0.68
OTUB1-211ENST00000543004 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 EMC8O43402 210 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 PSMG1O95456 288 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 ICAM2P13598 275 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 TP53BP2Q13625 1128 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 CYLC2Q14093 348 aaPredicted RBP19.3■□□□□ 0.68
OTUB1-211ENST00000543004 EBPQ15125 230 aaKnown RBP19.3■□□□□ 0.68
OTUB1-211ENST00000543004 OR7G1Q8NGA0 311 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 FBXO30Q8TB52 745 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 SNRNP27Q8WVK2 155 aaKnown RBP19.3■□□□□ 0.68
OTUB1-211ENST00000543004 GIMAP5Q96F15 307 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 AURKBQ96GD4 344 aaPredicted RBP19.3■□□□□ 0.68
OTUB1-211ENST00000543004 C16orf58Q96GQ5 468 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 GAL3ST4Q96RP7 486 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 DEFB126Q9BYW3 111 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 ARL8BQ9NVJ2 186 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 LEF1Q9UJU2 399 aaPredicted RBP19.3■□□□□ 0.68
OTUB1-211ENST00000543004 CPAMD8Q8IZJ3 1885 aa19.3■□□□□ 0.68
OTUB1-211ENST00000543004 RNF103-CHMP3A0A140T963 221 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 PRAMEF2O60811 474 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 SLITRK5O94991 958 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 HOXB9P17482 250 aaPredicted RBP19.29■□□□□ 0.68
OTUB1-211ENST00000543004 RPS26P62854 115 aaKnown RBP19.29■□□□□ 0.68
OTUB1-211ENST00000543004 NNATQ16517 81 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 REP15Q6BDI9 236 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 MSRB3Q8IXL7 192 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 TSPEARQ8WU66 669 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 EXTL1Q92935 676 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 RCN3Q96D15 328 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 SLC35A5Q9BS91 424 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 YIPF4Q9BSR8 244 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 ITPAQ9BY32 194 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 C3orf14Q9HBI5 128 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 SLC25A37Q9NYZ2 338 aa19.29■□□□□ 0.68
OTUB1-211ENST00000543004 NTMQ9P121 344 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms