RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PHC2Q8IXK0 858 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 UBQLNLQ8IYU4 475 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 LINC00471Q8N535 108 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 CELF2-AS1Q8N7Q2 184 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF366Q8N895 744 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM169BQ8N8A8 192 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MRPL43Q8N983 215 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ST13P5Q8NFI4 369 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 OR5AR1Q8NGP9 310 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC7A13Q8TCU3 470 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ASB15Q8WXK1 588 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 RAB8BQ92930 207 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TMCO6Q96DC7 493 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ERLEC1Q96DZ1 483 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZBED6CLQ96FA7 236 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TRMT61AQ96FX7 289 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MSLNLQ96KJ4 702 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 AGAP4Q96P64 663 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 QRFPRQ96P65 431 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 LRRC3BQ96PB8 259 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 F2RL3Q96RI0 385 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 IL4I1Q96RQ9 567 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TREX2Q9BQ50 279 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 AIF1LQ9BQI0 150 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 WFDC6Q9BQY6 131 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MND1Q9BWT6 205 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ROGDIQ9GZN7 287 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PCBD2Q9H0N5 130 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ABCG4Q9H172 646 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 POLR2J3Q9H1A7 115 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MIR1-1HGQ9H1L0 117 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 BCL2L10Q9HD36 194 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 MAN2C1Q9NTJ4 1040 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM39AQ9NV64 488 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 ZSCAN32Q9NX65 697 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DNAJC27Q9NZQ0 273 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 KLHL3Q9UH77 587 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 HCN2Q9UL51 889 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 DIMT1Q9UNQ2 313 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PCDHGB2Q9Y5G2 931 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 SNX8Q9Y5X2 465 aa4.91□□□□□ -1.62
ATPAF1-212ENST00000542495 PLXND1Q9Y4D7 1925 aa4.9□□□□□ -1.62
ATPAF1-212ENST00000542495 A0A0A6YYD5 115 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 EDDM13A0A1B0GTR0 161 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 HIDE1A8MVS5 230 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 RTCAO00442 366 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SMAD7O15105 426 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ST8SIA5O15466 376 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 NDUFS4O43181 175 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 PRKYO43930 277 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SSX4O60224 188 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TMPRSS11DO60235 418 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 OR10H3O60404 316 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SOX14O95416 240 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 EPPINO95925 133 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 IL1AP01583 271 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 APOA1P02647 267 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CLTBP09497 229 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ACADMP11310 421 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ADH5P11766 374 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CKMT1AP12532 417 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ADRB3P13945 408 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CSF2RAP15509 400 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CPEP16870 476 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 PSMA1P25786 263 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 FEN1P39748 380 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SOX3P41225 446 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 HTR3AP46098 478 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 RFX2P48378 723 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CCT3P49368 545 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 PCYT1AP49585 367 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 MAN2A2P49641 1150 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 RORCP51449 518 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CCR8P51685 355 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ST8SIA6P61647 398 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 COPZ1P61923 177 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 NTHL1P78549 312 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CDK5Q00535 292 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 INSM1Q01101 510 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 MESP2Q0VG99 397 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CNTN1Q12860 1018 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TP53BP2Q13625 1128 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 LARS2Q15031 903 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF79Q15937 498 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 GAB4Q2WGN9 574 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 HNRNPA1L2Q32P51 320 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 GLYR1Q49A26 553 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SYT14P1Q58G82 188 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 C3orf38Q5JPI3 329 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SNAP47Q5SQN1 464 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 METRNLQ641Q3 311 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM109BQ6ICB4 259 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM180BQ6P0A1 224 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 C1orf94Q6P1W5 598 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 PODNL1Q6PEZ8 512 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CASP12Q6UXS9 341 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM64Q6YI46 380 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms