RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ZNF770Q6IQ21 691 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 KIAA1161Q6NSJ0 714 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 C6orf120Q7Z4R8 191 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 COMTD1Q86VU5 262 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SLC30A8Q8IWU4 369 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TM9SF4Q92544 642 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 VOPP1Q96AW1 172 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 PHF21AQ96BD5 680 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 VWCEQ96DN2 955 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 DCLRE1CQ96SD1 692 aaKnown RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 GPA33Q99795 319 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 PAK6Q9NQU5 681 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 PLEKHB1Q9UF11 243 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 OR1A2Q9Y585 309 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 ALG5Q9Y673 324 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 DPM1O60762 260 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 RNF144AP50876 292 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 FAM209AQ5JX71 171 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 FAM71E1Q6IPT2 247 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TIGD4Q8IY51 512 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 PLA2G15Q8NCC3 412 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 OR8J1Q8NGP2 316 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 DOK4Q8TEW6 326 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SLC5A11Q8WWX8 675 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SMG7Q92540 1137 aaKnown RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SLC25A46Q96AG3 418 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 DACT3Q96B18 629 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 HDHD2Q9H0R4 259 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 GALNT9Q9HCQ5 603 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 COQ3Q9NZJ6 369 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 HCN2Q9UL51 889 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 C12orf71A8MTZ7 269 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SCO2O43819 266 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 ADAP00813 363 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 LIMS1P48059 325 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 GNG2P59768 71 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 WSCD2Q2TBF2 565 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 LCN1P1Q5VSP4 162 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 C19orf48Q6RUI8 117 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 IL20RBQ6UXL0 311 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 UNC5DQ6UXZ4 953 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 OR4K5Q8NGD3 323 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 OR56A3Q8NH54 315 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SETD6Q8TBK2 473 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 SUSD6Q92537 303 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TFGQ92734 400 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TBX5Q99593 518 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 PLA2G12AQ9BZM1 189 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TMEM38AQ9H6F2 299 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TRIM45Q9H8W5 580 aaPredicted RBP14.49□□□□□ -0.09
CNOT9-208ENST00000542068 ANKRA2Q9H9E1 313 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 CNIH4Q9P003 139 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 ENOPH1Q9UHY7 261 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 TRAPPC4Q9Y296 219 aa14.49□□□□□ -0.09
CNOT9-208ENST00000542068 ISM1B1AKI9 464 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 DVL2O14641 736 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 OR1F1O43749 312 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 GNRH1P01148 92 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 NR2F6P10588 404 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 PXNP49023 591 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CTBP2P56545 445 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 PCBP3P57721 371 aaKnown RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 EFR3AQ14156 821 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 ZNF791Q3KP31 576 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 SYT14P1Q58G82 188 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CEP78Q5JTW2 689 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 RFPL4BQ6ZWI9 263 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 GET4Q7L5D6 327 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 OR9A1PQ8NGU1 263 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.48□□□□□ -0.093e-7■■■□□ 16.7
CNOT9-208ENST00000542068 RNFT2Q96EX2 444 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 KATNB1Q9BVA0 655 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 EQTNQ9NQ60 294 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CUEDC1Q9NWM3 386 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 MCUBQ9NWR8 336 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 NDUFB11Q9NX14 153 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 SCN8AQ9UQD0 1980 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CENPBD1B2RD01 187 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 TNFRSF10AO00220 468 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 EIF3FO00303 357 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 NPC1O15118 1278 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 ARHGEF9O43307 516 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 KLHL18O94889 574 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 PAK4O96013 591 aaPredicted RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 ACP5P13686 325 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 HSD3B1P14060 373 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CELP19835 753 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 MMP11P24347 488 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 HSD3B2P26439 372 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CLCNKAP51800 687 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 ARPC4P59998 168 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 TAP2Q03519 686 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 PRAMEF14Q5SWL7 426 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 PRAMEF13Q5VWM6 474 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 LILRA6Q6PI73 481 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 MRPL43Q8N983 215 aaKnown RBP14.48□□□□□ -0.09
CNOT9-208ENST00000542068 OR4F15Q8NGB8 312 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 CXorf40AQ8TE69 158 aa14.48□□□□□ -0.09
CNOT9-208ENST00000542068 DEDD2Q8WXF8 326 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms