RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FBXO6Q9NRD1 293 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PPP1R14DQ9NXH3 145 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ARL15Q9NXU5 204 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 NSMCE4AQ9NXX6 385 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TAS2R13Q9NYV9 303 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TRMT6Q9UJA5 497 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CORO1CQ9ULV4 474 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PLCL2Q9UPR0 1127 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 FARSAQ9Y285 508 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 DTX4Q9Y2E6 619 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 SNX24Q9Y343 169 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 DHRS7Q9Y394 339 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 DMRT1Q9Y5R6 373 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 DPPA5A6NC42 116 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 C9J4A7 227 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 EBAG9O00559 213 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 EIF3HO15372 352 aaKnown RBP eCLIP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SLC16A5O15375 505 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SRPX2O60687 465 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 PSIP1O75475 530 aaKnown RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 CREG1O75629 220 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 OR2B3O76000 313 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SYF2O95926 243 aaKnown RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 IGLV2-14P01704 120 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 C8GP07360 202 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 GSTA2P09210 222 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 RAB40ALP0C0E4 278 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TPBGLP0DKB5 382 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 LYL1P12980 280 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TFEBP19484 476 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 HRH2P25021 359 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 IVDP26440 423 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 PTPN4P29074 926 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 RPA3P35244 121 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SLC1A2P43004 574 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SLC12A2P55011 1212 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 NR1H2P55055 460 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 CDH15P55291 814 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 KRTAP10-2P60368 255 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 HSF1Q00613 529 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 IFFO1Q0D2I5 559 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 KLF10Q13118 480 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 FRG1Q14331 258 aaKnown RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 KCTD19Q17RG1 926 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 WHAMMP3Q1A5X7 153 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 ACSBG2Q5FVE4 666 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TCTE1Q5JU00 501 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 FAM45BPQ6NSW5 357 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 FIGLAQ6QHK4 219 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SYVN1Q86TM6 617 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 GGNQ86UU5 652 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 CNTN4Q8IWV2 1026 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 DNAJC22Q8N4W6 341 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 C2orf73Q8N5S3 287 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 GPATCH11Q8N954 259 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 LMNTD1Q8N9Z9 388 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TTC29Q8NA56 475 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 OSR1Q8TAX0 266 aaPredicted RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 FAM45AQ8TCE6 357 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SMPDL3AQ92484 453 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 STARD8Q92502 1023 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 MED8Q96G25 268 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 CFAP36Q96G28 342 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 CABS1Q96KC9 395 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 GPR21Q99679 349 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TRIM51Q9BSJ1 452 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 FUZQ9BT04 418 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 FUT8Q9BYC5 575 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 PCBD2Q9H0N5 130 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 ADNPQ9H2P0 1102 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 BATF3Q9NR55 127 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TXLNGQ9NUQ3 528 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SPHK1Q9NYA1 384 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 IL1RAPL1Q9NZN1 696 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TXNDC16Q9P2K2 825 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 ANKMY1Q9P2S6 941 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 RALYQ9UKM9 306 aaKnown RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 PLAGL1Q9UM63 463 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 CHMP2BQ9UQN3 213 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 OSGIN2Q9Y236 505 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 PADI2Q9Y2J8 665 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 NFS1Q9Y697 457 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 TEX264Q9Y6I9 313 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 MAP1BP46821 2468 aaKnown RBP5.09□□□□□ -1.59
CPSF7-220ENST00000541963 ACACAQ13085 2346 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 ASPMQ8IZT6 3477 aa5.09□□□□□ -1.59
CPSF7-220ENST00000541963 SDK2Q58EX2 2172 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 E7ESA3 106 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 GFYI3L273 518 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 TXNDC9O14530 226 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 ZNF749O43361 778 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 RAD51CO43502 376 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 NUDT3O95989 172 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 IGHEP01854 428 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 PVRP15151 417 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 IDUAP35475 653 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 ARL1P40616 181 aaPredicted RBP5.08□□□□□ -1.6
CPSF7-220ENST00000541963 BDKRB1P46663 353 aa5.08□□□□□ -1.6
CPSF7-220ENST00000541963 RPL21P46778 160 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms