RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 E7ENQ6 273 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 FCER2P06734 321 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 SNRPCP09234 159 aaKnown RBP4.28□□□□□ -1.72
YBX3-210ENST00000540975 GDF1P27539 372 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 SLC25A1P53007 311 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 RIPK4P57078 832 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 STX1BP61266 288 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 CXCL6P80162 114 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 CDKL1Q00532 357 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 MPPE1Q53F39 396 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 PARP10Q53GL7 1025 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 DDI2Q5TDH0 399 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 PRAMEF8Q5VWM4 474 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 MOB2Q70IA6 237 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 KCTD9Q7L273 389 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 GPR142Q7Z601 462 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 VASH2Q86V25 355 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 PRR22Q8IZ63 422 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 FBXW8Q8N3Y1 598 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 ZNF525Q8N782 197 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 OR6M1Q8NGM8 313 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 CRYGNQ8WXF5 182 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 GLYATL1Q969I3 302 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 MRPL53Q96EL3 112 aaKnown RBP4.28□□□□□ -1.72
YBX3-210ENST00000540975 PIWIL1Q96J94 861 aaKnown RBP4.28□□□□□ -1.72
YBX3-210ENST00000540975 DDX50Q9BQ39 737 aaKnown RBP4.28□□□□□ -1.72
YBX3-210ENST00000540975 CACNG6Q9BXT2 260 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 GANQ9H2C0 597 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 ADGRL4Q9HBW9 690 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 MED4Q9NPJ6 270 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 IMPAD1Q9NX62 359 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 TBK1Q9UHD2 729 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 ATG4BQ9Y4P1 393 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 KIF21BO75037 1637 aa4.28□□□□□ -1.72
YBX3-210ENST00000540975 FAM25EA8MYX2 175 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 KIF5BP33176 963 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 DRD3P35462 400 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 SLC7A2P52569 658 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 SH3BGRP55822 239 aaPredicted RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 MSLNQ13421 630 aaPredicted RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 GK2Q14410 553 aaPredicted RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 SLMAPQ14BN4 828 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 MICAQ29983 383 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 EPC2Q52LR7 807 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 ACER2Q5QJU3 275 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 STEAP1BQ6NZ63 245 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 APOOLQ6UXV4 268 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 GCNT7Q6ZNI0 430 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 NAT8LQ8N9F0 302 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 VN1R17PQ8TDU5 208 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 PHYHIPLQ96FC7 376 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 JAKMIP1Q96N16 626 aaKnown RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 C19orf43Q9BQ61 176 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 IQCGQ9H095 443 aaKnown RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 ABCG4Q9H172 646 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 RPAP3Q9H6T3 665 aaPredicted RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 DCTPP1Q9H773 170 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 RRP15Q9Y3B9 282 aaKnown RBP4.27□□□□□ -1.73
YBX3-210ENST00000540975 N6AMT1Q9Y5N5 214 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 VPS8Q8N3P4 1428 aa4.27□□□□□ -1.73
YBX3-210ENST00000540975 AFF2P51816 1311 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 TRABD2BA6NFA1 517 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 CACNB4O00305 520 aaPredicted RBP4.26□□□□□ -1.73
YBX3-210ENST00000540975 ZNF263O14978 683 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 GMNNO75496 209 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 NUDT14O95848 222 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 IGHV3-9P01782 118 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 SBK2P0C263 348 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 ZBTB25P24278 435 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 CTNNB1P35222 781 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 MAGEA9P43362 315 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 KRTAP13-3Q3SY46 172 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 RTL6Q6ICC9 239 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 PRSS42Q7Z5A4 293 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 STHQ8IWL8 128 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 COG3Q96JB2 828 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 FUT8Q9BYC5 575 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 PDFQ9HBH1 243 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 DNAJC11Q9NVH1 559 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 C6orf203Q9P0P8 240 aaPredicted RBP4.26□□□□□ -1.73
YBX3-210ENST00000540975 TUBGCP4Q9UGJ1 667 aa4.26□□□□□ -1.73
YBX3-210ENST00000540975 DIMT1Q9UNQ2 313 aaKnown RBP4.26□□□□□ -1.73
YBX3-210ENST00000540975 FOXA2Q9Y261 457 aaPredicted RBP4.26□□□□□ -1.73
YBX3-210ENST00000540975 ZBED9Q6R2W3 1325 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 WDR97A6NE52 1622 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 A0A0A6YYD4 124 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 EFCAB7A8K855 629 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 FAM220BPB1ANY3 271 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 H0YHG0 523 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 KIAA0754O94854 1291 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 GJB5O95377 273 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 OAS1P00973 400 aaKnown RBP4.25□□□□□ -1.73
YBX3-210ENST00000540975 UROSP10746 265 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 ATP6V1B1P15313 513 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 UCP1P25874 307 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 CLIP1P30622 1438 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 TRIM23P36406 574 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 RGRP47804 291 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 BPIFB3P59826 476 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 SARNPP82979 210 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms