RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 GAB2Q9UQC2 676 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 RIPK3Q9Y572 518 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 LRRC72A6NJI9 287 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 OR2T1O43869 369 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 ADRA1BP35368 520 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 MFSD14CQ5VZR4 134 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 NIPA2Q8N8Q9 360 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 MAPK15Q8TD08 544 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 BTF3L4Q96K17 158 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 TRAF4Q9BUZ4 470 aaPredicted RBP8.38□□□□□ -1.07
YBX3-208ENST00000540447 OR52A5Q9H2C5 316 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 SLC6A20Q9NP91 592 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 OSGIN1Q9UJX0 560 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 UGGT1Q9NYU2 1555 aa8.38□□□□□ -1.07
YBX3-208ENST00000540447 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 TRAV18A0A075B6X5 111 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 YDJCA8MPS7 323 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 GABRDO14764 452 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 B4GALT4O60513 344 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 SERPINA7P05543 415 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 THP07101 528 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 VEGFAP15692 232 aaPredicted RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 CLLU1Q5K131 121 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 RAET1GQ6H3X3 334 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 TMEM102Q8N9M5 508 aaPredicted RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 IL17RCQ8NAC3 791 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 RNF170Q96K19 258 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 MTERF1Q99551 399 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 ELOVL4Q9GZR5 314 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 TMEM134Q9H6X4 195 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 KCNS2Q9ULS6 477 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 EXO1Q9UQ84 846 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 FFAR2O15552 330 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 CKMP06732 381 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 CYP2B6P20813 491 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 CNR1P21554 472 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 BMP8BP34820 402 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 MRPL19P49406 292 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 TAS2R20P59543 309 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 PPP4CP60510 307 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 CDC42EP5Q6NZY7 148 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 PAQR3Q6TCH7 311 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 BMP8AQ7Z5Y6 402 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 TRAPPC12Q8WVT3 735 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NIPSNAP3BQ9BS92 247 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 VPS29Q9UBQ0 182 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 AGO1Q9UL18 857 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 NPIPA2E9PIF3 369 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NPIPA5E9PKD4 350 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NPIPA3F8WFD2 350 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 LILRB5O75023 590 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 DNAJB6O75190 326 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ALDOAP04075 364 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 CSTBP04080 98 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 TPOP07202 933 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ITGA5P08648 1049 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 C21orf33P30042 268 aaPredicted RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 UBE2IP63279 158 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 PLA2G7Q13093 441 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ZNF791Q3KP31 576 aaPredicted RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 FAM182AQ5T1J6 154 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 CEACAM20Q6UY09 585 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ZNF808Q8N4W9 903 aaPredicted RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 OR10D4PQ8NGN7 298 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NUDT9Q9BW91 350 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NPIPA1Q9UND3 350 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 RCE1Q9Y256 329 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 MED16Q9Y2X0 877 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ACSM4P0C7M7 580 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 GAAP10253 952 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 IL13RA1P78552 427 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 TLE1Q04724 770 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NKPD1Q17RQ9 610 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 C6orf136Q5SQH8 315 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 DCLRE1AQ6PJP8 1040 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 LILRA2Q8N149 483 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 CEMIPQ8WUJ3 1361 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 THBS1P07996 1170 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 DHRS4L1P0CG22 281 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ATP5A1P25705 553 aaKnown RBP8.37□□□□□ -1.07
YBX3-208ENST00000540447 INHBEP58166 350 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 SERINC3Q13530 473 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 LRRC32Q14392 662 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 PPA1Q15181 289 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 TMEM150AQ86TG1 271 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 C12orf40Q86WS4 652 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ADGRG3Q86Y34 549 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 UEVLDQ8IX04 471 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 GPRC5AQ8NFJ5 357 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 OR2AJ1Q8NGZ0 328 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 ELP5Q8TE02 316 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 NTMT1Q9BV86 223 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 SLC25A51Q9H1U9 297 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 DCAF16Q9NXF7 216 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 PSAT1Q9Y617 370 aa8.37□□□□□ -1.07
YBX3-208ENST00000540447 M0R143 59 aa8.36□□□□□ -1.07
YBX3-208ENST00000540447 HCRTR2O43614 444 aa8.36□□□□□ -1.07
YBX3-208ENST00000540447 HCKP08631 526 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms