RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 NHLRC1Q6VVB1 395 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 RGL4Q8IZJ4 473 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 RXFP4Q8TDU9 374 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 SCARB1Q8WTV0 552 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 XAGE5Q8WWM1 108 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 MED18Q9BUE0 208 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 SLC25A18Q9H1K4 315 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 TFB2MQ9H5Q4 396 aaKnown RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 URGCP-MRPS24S4R325 110 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 LOC285095A0A1B0GVY8 99 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 ADAM12O43184 909 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 AKR7A3O95154 331 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 SNAPINO95295 136 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 TGM6O95932 706 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 SNRPBP14678 240 aaKnown RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 SOX18P35713 384 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 RENBPP51606 427 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 AFF3P51826 1226 aaKnown RBP10.56□□□□□ -0.72
PBX1-212ENST00000540236 MTAPQ13126 283 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 C1orf189Q5VU69 101 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 TMEM71Q6P5X7 295 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 TMEM43Q9BTV4 400 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 LANCL2Q9NS86 450 aa10.56□□□□□ -0.72
PBX1-212ENST00000540236 RGS9O75916 674 aaPredicted RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 C6orf47O95873 294 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 WDPCPO95876 746 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 EIF4EP06730 217 aaKnown RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 ADH1AP07327 375 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 NFYBP25208 207 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 EIF2S3LQ2VIR3 472 aaKnown RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 CARNMT1Q8N4J0 409 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 OR6S1Q8NH40 331 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 RAB8BQ92930 207 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 THOC3Q96J01 351 aaKnown RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 FAM167AQ96KS9 214 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 OR2M4Q96R27 311 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 NUSAP1Q9BXS6 441 aaKnown RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 GABRQQ9UN88 632 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 TMX2Q9Y320 296 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 AK6Q9Y3D8 172 aaKnown RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 A0A0B4J2A0 478 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 MANBAO00462 879 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 MATN4O95460 622 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 PRAMEF12O95522 483 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 SPARCP09486 303 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 ANKRD34CP0C6C1 535 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 F3P13726 295 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 RSU1Q15404 277 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 PDSS1Q5T2R2 415 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 UNC5DQ6UXZ4 953 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 ZNF705AQ6ZN79 300 aaPredicted RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 ZFPM2Q8WW38 1151 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 RNF170Q96K19 258 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 GAL3ST4Q96RP7 486 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 IFT27Q9BW83 186 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 MAGIXQ9H6Y5 334 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 ASB8Q9H765 288 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 ZNF226Q9NYT6 803 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 SHPKQ9UHJ6 478 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 CD84Q9UIB8 345 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 LMO7Q8WWI1 1683 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 TMEM235A6NFC5 223 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 CCSO14618 274 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 RAMP2O60895 175 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 RPP30P78346 268 aaKnown RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 GBX1Q14549 363 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 TCEA2Q15560 299 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 MICAQ29983 383 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 HIST2H2AA3Q6FI13 130 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 KRT77Q7Z794 578 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 FCRL2Q96LA5 508 aaPredicted RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 SMIM14Q96QK8 99 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 SARDHQ9UL12 918 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 YJEFN3A6XGL0 299 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 PRSS23O95084 383 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 CTSHP09668 335 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 RRASP10301 218 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 NDUFB7P17568 137 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 BTN3A2P78410 334 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 SOX4Q06945 474 aaPredicted RBP10.55□□□□□ -0.72
PBX1-212ENST00000540236 ST3GAL2Q16842 350 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 OR5M10Q6IEU7 315 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 OR4F15Q8NGB8 312 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 ACBD6Q9BR61 282 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 BARHL1Q9BZE3 327 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 XYLT2Q9H1B5 865 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 TAS2R10Q9NYW0 307 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 GPR160Q9UJ42 338 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 PCOLCE2Q9UKZ9 415 aa10.55□□□□□ -0.72
PBX1-212ENST00000540236 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
PBX1-212ENST00000540236 A0A1B0GVM2 712 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 A0A1B0GVT2 93 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 FZD7O75084 574 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 HLA-DPB1P04440 258 aa10.54□□□□□ -0.72
PBX1-212ENST00000540236 SCG5P05408 212 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms