RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 MIEF1Q9NQG6 463 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 PRDM9Q9NQV7 894 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 FBXO8Q9NRD0 319 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 GPATCH2Q9NW75 528 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 LYARQ9NX58 379 aaKnown RBP8.34□□□□□ -1.07
DDB1-213ENST00000539332 EPHA6Q9UF33 1036 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 CES1P1Q9UKY3 287 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 GTF2A1LQ9UNN4 478 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 PCDHGB2Q9Y5G2 931 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 SNX5Q9Y5X3 404 aa8.34□□□□□ -1.07
DDB1-213ENST00000539332 NUP210LQ5VU65 1888 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 A0A0G2JN53 185 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 A0A1W2PRB8 838 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CDX4O14627 284 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 PDPK1O15530 556 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 GUCY1B2O75343 617 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 GMNNO75496 209 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 TNFRSF21O75509 655 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CREG1O75629 220 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SERPIND1P05546 499 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CKMT1AP12532 417 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 PNLIPP16233 465 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 EFNA1P20827 205 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 MATN1P21941 496 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CD1CP29017 333 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NBL1P41271 181 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 GRK6P43250 576 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ALDH3A2P51648 485 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 GPLD1P80108 840 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 FADDQ13158 208 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 KRR1Q13601 381 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 VEZF1Q14119 521 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SUZ12Q15022 739 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 RGNQ15493 299 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 DGUOKQ16854 277 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NDUFAF5Q5TEU4 345 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 PLEKHG7Q6ZR37 379 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 LILRB2Q8N423 598 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 Q8N9G6 341 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 KCT2Q8NC54 265 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CAMKVQ8NCB2 501 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 OR52N2Q8NGI0 321 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 FAM110BQ8TC76 370 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 KLHL6Q8WZ60 621 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NAT6Q93015 286 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SDCCAG3Q96C92 435 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 AHCYL2Q96HN2 611 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 DEPDC7Q96QD5 511 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 MACROD1Q9BQ69 325 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 FAIM2Q9BWQ8 316 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ROGDIQ9GZN7 287 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 KLHL25Q9H0H3 589 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NECTIN3Q9NQS3 549 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 RXFP3Q9NSD7 469 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SIRT3Q9NTG7 399 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 DCAF13Q9NV06 445 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ENPP5Q9UJA9 477 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 CORINQ9Y5Q5 1042 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 FER1L5A0AVI2 2057 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 A0A1W2PR48 441 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 URADA6NGE7 173 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SAGE2PA6NJ88 616 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 H0YGG7 62 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 M0QX08 132 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 RGS13O14921 159 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CASC3O15234 703 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 PROM1O43490 865 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 DUX1O43812 170 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 FOXD2O60548 495 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 PRAMEF10O60809 474 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 PRSS23O95084 383 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 AIFM1O95831 613 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 STATHP02808 62 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ZNF888P0CJ79 500 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 ST6GAL1P15907 406 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 UQCRC2P22695 453 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 TGM1P22735 817 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CERS1P27544 350 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CSF2RBP32927 897 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 PCGF2P35227 344 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 OPRL1P41146 370 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 GFERP55789 205 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ARF3P61204 181 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 EEF1A2Q05639 463 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 SLAMF1Q13291 335 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 IL18R1Q13478 541 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 DAG1Q14118 895 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 OCLNQ16625 522 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 INAVAQ3KP66 663 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 AMZ1Q400G9 498 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 PERM1Q5SV97 790 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SLX4IPQ5VYV7 408 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SAXO2Q658L1 398 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 FRMPD2BQ6IN97 320 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 TUBA3EQ6PEY2 450 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms