RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ZNF835Q9Y2P0 537 aa12.65□□□□□ -0.38
CD9-208ENST00000538834 KLF13Q9Y2Y9 288 aaPredicted RBP12.65□□□□□ -0.38
CD9-208ENST00000538834 CHCHD2Q9Y6H1 151 aaPredicted RBP12.65□□□□□ -0.38
CD9-208ENST00000538834 ZNF780BQ9Y6R6 833 aa12.65□□□□□ -0.38
CD9-208ENST00000538834 C2orf92A0A1B0GVN3 265 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 PINLYPA6NC86 204 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 ANKUB1A6NFN9 424 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 A8MVJ9 347 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 GLSO94925 669 aaPredicted RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 SLITRK5O94991 958 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 CHEK2O96017 543 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 UQCRHP07919 91 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 PCSK2P16519 638 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 NAGAP17050 411 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 CNR1P21554 472 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 NT5EP21589 574 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 BGNP21810 368 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 MAP3K8P41279 467 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 SLC1A6P48664 564 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 ALDH9A1P49189 494 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 MAGOHP61326 146 aaKnown RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 BST1Q10588 318 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 MAPKAPK3Q16644 382 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 ZNF385BQ569K4 471 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 BNC2Q6ZN30 1099 aaPredicted RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 RTL4Q6ZR62 310 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 SLC29A4Q7RTT9 530 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 TICAM1Q8IUC6 712 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 RIMKLAQ8IXN7 391 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 CPSF7Q8N684 471 aaKnown RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 ADCY4Q8NFM4 1077 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 TMEM125Q96AQ2 219 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 MTERF3Q96E29 417 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 SPACA9Q96E40 222 aaPredicted RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 PPP3R2Q96LZ3 170 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 AMDHD1Q96NU7 426 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 CENPHQ9H3R5 247 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 VIPAS39Q9H9C1 493 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 HPF1Q9NWY4 346 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 ATP6V1HQ9UI12 483 aa12.64□□□□□ -0.39
CD9-208ENST00000538834 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 GPR55Q9Y2T6 319 aaPredicted RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
CD9-208ENST00000538834 WDR91A4D1P6 747 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 KLRC4-KLRK1H3BQV0 150 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 PEX1O43933 1283 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 BCAS2O75934 225 aaPredicted RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 CT45A8P0DMV1 189 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 CT45A9P0DMV2 189 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 CCL3P10147 92 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 DRD5P21918 477 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 MPIP34949 423 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 PTGER1P34995 402 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 PPICP45877 212 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 RPL14P50914 215 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 MRPS35P82673 323 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 UBAP2LQ14157 1087 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 EXOSC7Q15024 291 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 KRTCAP3Q53RY4 240 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 CT45A2Q5DJT8 189 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 EXOSC6Q5RKV6 272 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 Q6ZPB1 254 aaPredicted RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 FAM26EQ8N5C1 309 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 OR2M7Q8NG81 312 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 OR7G2Q8NG99 324 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 OR9A2Q8NGT5 310 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 SLC22A8Q8TCC7 542 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 EXOSC8Q96B26 276 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 HSPBAP1Q96EW2 488 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 VSTM2LQ96N03 204 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 GPR137Q96N19 417 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 BTBD9Q96Q07 612 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 SECISBP2Q96T21 854 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 REEP4Q9H6H4 257 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 ZDHHC11Q9H8X9 412 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 TIMMDC1Q9NPL8 285 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 GIMAP2Q9UG22 337 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 BAIAP2L1Q9UHR4 511 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 C19orf53Q9UNZ5 99 aaPredicted RBP12.63□□□□□ -0.39
CD9-208ENST00000538834 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 FIS1Q9Y3D6 152 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
CD9-208ENST00000538834 HECTD1Q9ULT8 2610 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 ATP6AP2A0A1C7CYW4 349 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 KLF11O14901 512 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 SEMA7AO75326 666 aa12.62□□□□□ -0.39
CD9-208ENST00000538834 ATP6AP2O75787 350 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms