RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CDS1Q92903 461 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 SLC35A4Q96G79 324 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 SEMA6CQ9H3T2 930 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 AMBNQ9NP70 447 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 SEMA3GQ9NS98 782 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 GIMAP4Q9NUV9 329 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 FBXO34Q9NWN3 711 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 SOHLH2Q9NX45 425 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 LYARQ9NX58 379 aaKnown RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 PCDHGB3Q9Y5G1 929 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 MAU2Q9Y6X3 613 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 TTC28Q96AY4 2481 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 TMX2-CTNND1H3BSU7 103 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 GALR3O60755 368 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 FHP07954 510 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 PDX1P52945 283 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 RAD23AP54725 363 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 SEC23BQ15437 767 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 GKN2Q86XP6 184 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 PEX11GQ96HA9 241 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 ORC6Q9Y5N6 252 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 ADAMTS9Q9P2N4 1935 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 HRKO00198 91 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 CYR61O00622 381 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 IFNW1P05000 195 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 NT5EP21589 574 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 CAPZBP47756 277 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 FOXL2P58012 376 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 PMS2P3Q13401 168 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 MLIPQ5VWP3 458 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 TTC23Q5W5X9 447 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 CA13Q8N1Q1 262 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 OR4C15Q8NGM1 316 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 GIPC3Q8TF64 312 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 PIK3R3Q92569 461 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 NELL2Q99435 816 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 C8orf4Q9NR00 106 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 RNF215Q9Y6U7 377 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-205ENST00000538545 TGFBR3LH3BV60 316 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 BCAT2O15382 392 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-205ENST00000538545 EMC8O43402 210 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 PIAS2O75928 621 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 GADD45GO95257 159 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 CPMP14384 443 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF691Q5VV52 312 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 CADM4Q8NFZ8 388 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 OR6T1Q8NGN1 323 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 ZFPM2Q8WW38 1151 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 PROX1Q92786 737 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 MYCBPQ99417 103 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-205ENST00000538545 LRIT1Q9P2V4 623 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 PSME2Q9UL46 239 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 FAM32AQ9Y421 112 aaKnown RBP13.24□□□□□ -0.29
ACTN1-205ENST00000538545 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 ENPP4Q9Y6X5 453 aa13.24□□□□□ -0.29
ACTN1-205ENST00000538545 URADA6NGE7 173 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 GASTP01350 101 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 HTR1AP08908 422 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 TSFMP43897 325 aaKnown RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 GSTM5P46439 218 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 FASLGP48023 281 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 KCNJ5P48544 419 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 DHPSP49366 369 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 NR1H2P55055 460 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 BTG2P78543 158 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 PRR5P85299 388 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 C6orf141Q5SZD1 244 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 KCTD8Q6ZWB6 473 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 PARP8Q8N3A8 854 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 NATD1Q8N6N6 113 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 OR2I1PQ8NGU4 316 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 PHF10Q8WUB8 498 aaKnown RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CLDN23Q96B33 292 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF764Q96H86 408 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 PIP5K1AQ99755 562 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 NAA50Q9GZZ1 169 aaKnown RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 SPRTNQ9H040 489 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 POLR1BQ9H9Y6 1135 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 NMNAT1Q9HAN9 279 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 ADAMDEC1O15204 470 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 ZSCAN9O15535 394 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CHST10O43529 356 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 SOX14O95416 240 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CRHBPP24387 322 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 PCSK6P29122 969 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 MAN2A2P49641 1150 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 KHKP50053 298 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CRISP3P54108 245 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CFHR1Q03591 330 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 NPRL3Q12980 569 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 CEBPEQ15744 281 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 DUSP5Q16690 384 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 FAHD1Q6P587 224 aa13.23□□□□□ -0.29
ACTN1-205ENST00000538545 SPACA7Q96KW9 195 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms