RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PDZD3Q86UT5 571 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CADM2Q8N3J6 435 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 Q8N402 240 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FAM109AQ8N4B1 249 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SLC7A13Q8TCU3 470 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CHFRQ96EP1 664 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 RNFT2Q96EX2 444 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 MARVELD1Q9BSK0 173 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM43Q9BTV4 400 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 BEX2Q9BXY8 128 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 PRRG3Q9BZD7 231 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 P2RX2Q9UBL9 471 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 SEC14L3Q9UDX4 400 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FBXW2Q9UKT8 454 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 POLHQ9Y253 713 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CCL26Q9Y258 94 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 CARD8Q9Y2G2 431 aa11.49□□□□□ -0.57
CPSF7-218ENST00000537641 FAM240BA0A1B0GVZ2 78 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 ANKDD1BA6NHY2 528 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 CASKO14936 926 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 KIAA0355O15063 1070 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 CCL16O15467 120 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SLC19A2O60779 497 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 LINC00271P0C7V0 271 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 ACRP10323 421 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 PSKH1P11801 424 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 MMP11P24347 488 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 PDHA2P29803 388 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 CCR2P41597 374 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 GIPRP48546 466 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 EPHA5P54756 1037 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 MANFP55145 182 aaKnown RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM115Q12893 351 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 DSG2Q14126 1118 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 WSCD2Q2TBF2 565 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 BTBD16Q32M84 506 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 IER5LQ5T953 404 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM220Q6QAJ8 160 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 LCTLQ6UWM7 567 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 PRICKLE2Q7Z3G6 844 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM25Q86YD3 366 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 NRSN1Q8IZ57 195 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 CELF5Q8N6W0 485 aaKnown RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SYT14Q8NB59 555 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TMEM145Q8NBT3 493 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 OR4K5Q8NGD3 323 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SUN5Q8TC36 379 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 DEDD2Q8WXF8 326 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SMPDL3AQ92484 453 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 NR4A3Q92570 626 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TRIM43Q96BQ3 446 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 AP2M1Q96CW1 435 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 ZBED6CLQ96FA7 236 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 PRRC1Q96M27 445 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 QRFPRQ96P65 431 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 KCNJ15Q99712 375 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 ATF6BQ99941 703 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 ARHGAP9Q9BRR9 750 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 MKRN2Q9H000 416 aaKnown RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SPNS1Q9H2V7 528 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 MVB12BQ9H7P6 319 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TRIM45Q9H8W5 580 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SLAMF7Q9NQ25 335 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 SIRT3Q9NTG7 399 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 MRPL39Q9NYK5 338 aaKnown RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 YARS2Q9Y2Z4 477 aaKnown RBP11.48□□□□□ -0.57
CPSF7-218ENST00000537641 CCDC88CQ9P219 2028 aa11.48□□□□□ -0.57
CPSF7-218ENST00000537641 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 HMGN4O00479 90 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 PI15O43692 258 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 OR2B3O76000 313 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 EPHX1P07099 455 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 GALP22466 123 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 PBLDP30039 288 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SSTR4P31391 388 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 EVX1P49640 407 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 PCBP4P57723 403 aaKnown RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 BTG1P62324 171 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 RPS26P62854 115 aaKnown RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 HTRA4P83105 476 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 FABP5Q01469 135 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 TAP2Q03519 686 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 ACSM1Q08AH1 577 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 TSTA3Q13630 321 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-218ENST00000537641 MLC1Q15049 377 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 ANGPT1Q15389 498 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SNAPC1Q16533 368 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 PRAMEF14Q5SWL7 426 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 PRAMEF13Q5VWM6 474 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 ACSM5Q6NUN0 579 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 TMIGD1Q6UXZ0 262 aa11.47□□□□□ -0.57
CPSF7-218ENST00000537641 FAM83HQ6ZRV2 1179 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms