RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CSNK2A2P19784 350 aaPredicted RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 GPX3P22352 226 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 CNTFP26441 200 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 ABCD3P28288 659 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 GCKP35557 465 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 TIMP3P35625 211 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 CASP3P42574 277 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 WNT3P56703 355 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 SNTB1Q13884 538 aaKnown RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 SLC48A1Q6P1K1 146 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 RELL1Q8IUW5 271 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 NAXEQ8NCW5 288 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 TNIP2Q8NFZ5 429 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 OR1J4Q8NGS1 313 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 TRPC4APQ8TEL6 797 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 SELENOMQ8WWX9 145 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 KLHL29Q96CT2 875 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 TMEM41AQ96HV5 264 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 GNRHR2Q96P88 292 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 FMO2Q99518 471 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 TIMP4Q99727 224 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 MRPL57Q9BQC6 102 aaKnown RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 GPATCH1Q9BRR8 931 aaKnown RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 FAIM2Q9BWQ8 316 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 FUT8Q9BYC5 575 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 PRDM14Q9GZV8 571 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 NXF5Q9H1B4 397 aaKnown RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 MRPL46Q9H2W6 279 aaKnown RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 UBQLN3Q9H347 655 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 BRF2Q9HAW0 419 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 FARSBQ9NSD9 589 aaKnown RBP8.86□□□□□ -0.99
CHD4-207ENST00000537634 NMRK1Q9NWW6 199 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 BCAP29Q9UHQ4 241 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 PSME2Q9UL46 239 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 SNX6Q9UNH7 406 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 SLC6A5Q9Y345 797 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 PCDHA9Q9Y5H5 950 aa8.86□□□□□ -0.99
CHD4-207ENST00000537634 ANKHD1Q8IWZ3 2542 aaKnown RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 A8MT66 165 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 KDM4EB2RXH2 506 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 TRIM49D1C9J1S8 452 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 POC1B-GALNT4F8VUJ3 575 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 SYT5O00445 386 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 GNB5O14775 395 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ACOX3O15254 700 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 URI1O94763 535 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 PDYNP01213 254 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ABCB1P08183 1280 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 NAGAP17050 411 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 BMP7P18075 431 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 S1PR1P21453 382 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 FEN1P39748 380 aaKnown RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 ALDH9A1P49189 494 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 IST1P53990 364 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 PLCXD2Q0VAA5 305 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 GALNT1Q10472 559 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 MAP4K2Q12851 820 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 RCAN2Q14206 197 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 EXOSC7Q15024 291 aaKnown RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 WHAMMP3Q1A5X7 153 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 PRICKLE4Q2TBC4 344 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 FLYWCH1Q4VC44 716 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 EIPR1Q53HC9 387 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 NHSL2Q5HYW2 709 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 WIPI1Q5MNZ9 446 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 FNDC7Q5VTL7 733 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 NSUN5P2Q63ZY6 315 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 TIGD3Q6B0B8 471 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 VASNQ6EMK4 673 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 LETMD1Q6P1Q0 360 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 FAM111BQ6SJ93 734 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ANGPTL8Q6UXH0 198 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 RPS27LQ71UM5 84 aaKnown RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 MMP21Q8N119 569 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ZNF483Q8TF39 744 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 NINJ1Q92982 152 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 OMA1Q96E52 524 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 RMND5BQ96G75 393 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 LCORQ96JN0 433 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 TRIB1Q96RU8 372 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 SH3GL2Q99962 352 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 OSBPL11Q9BXB4 747 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ITPAQ9BY32 194 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 UGT2B28Q9BY64 529 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 CLEC4MQ9H2X3 399 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 PFDN4Q9NQP4 134 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 MAT2BQ9NZL9 334 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 KLRF1Q9NZS2 232 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 CRIM1Q9NZV1 1036 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ZNF629Q9UEG4 869 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 FOXD3Q9UJU5 478 aaPredicted RBP8.85□□□□□ -0.99
CHD4-207ENST00000537634 ZNF180Q9UJW8 692 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 CES1P1Q9UKY3 287 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 EDARQ9UNE0 448 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 DTX4Q9Y2E6 619 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 ZNF780BQ9Y6R6 833 aa8.85□□□□□ -0.99
CHD4-207ENST00000537634 CELSR1Q9NYQ6 3014 aa8.84□□□□□ -0.99
CHD4-207ENST00000537634 A0A087WUV0 522 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms