RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 PLIN5Q00G26 463 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 TNFRSF17Q02223 184 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 ID2Q02363 134 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 IRF8Q02556 426 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 LTBQ06643 244 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 FUT7Q11130 342 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 DLG1Q12959 904 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 PDIA2Q13087 525 aaKnown RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SLAMF1Q13291 335 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 CUL3Q13618 768 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 FASTKD3Q14CZ7 662 aaKnown RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SF3B4Q15427 424 aaKnown RBP eCLIP4.79□□□□□ -1.644e-47■■■■■ 46.5
SNHG1-204ENST00000537068 HIST2H2ACQ16777 129 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 FBXO48Q5FWF7 155 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 PAGE2BQ5JRK9 111 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 PRAMEF20Q5VT98 475 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 LIPJQ5W064 366 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 TMEM198Q66K66 360 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 C18orf63Q68DL7 685 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 HIST2H2AA3Q6FI13 130 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 GRHL2Q6ISB3 625 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 MED27Q6P2C8 311 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 FRA10AC1Q70Z53 315 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 GPR180Q86V85 440 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 GPSM1Q86YR5 675 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 CREG2Q8IUH2 290 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 PM20D2Q8IYS1 436 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SLC35F6Q8N357 371 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SPATA6LQ8N4H0 392 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 ZNF615Q8N8J6 731 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 WFDC11Q8NEX6 87 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 OR10G3Q8NGC4 313 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SPPL2AQ8TCT8 520 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 UBTD2Q8WUN7 234 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 UCN3Q969E3 161 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 UBE2E3Q969T4 207 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 RGMAQ96B86 450 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 LRRC46Q96FV0 321 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 CFAP36Q96G28 342 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 TMEM41AQ96HV5 264 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 DGAT2Q96PD7 388 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 GPR22Q99680 433 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 RBBP8Q99708 897 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 PELOQ9BRX2 385 aaKnown RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 WWTR1Q9GZV5 400 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SLC6A15Q9H2J7 730 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 EPB41L4BQ9H329 900 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 OR51B5Q9H339 312 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 DDX31Q9H8H2 851 aaKnown RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 CAB39LQ9H9S4 337 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 ALKBH4Q9NXW9 302 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 WWOXQ9NZC7 414 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 MTRF1LQ9UGC7 380 aaKnown RBP4.79□□□□□ -1.64
SNHG1-204ENST00000537068 PHF11Q9UIL8 331 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 SPACA6W5XKT8 324 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 ABCA4P78363 2273 aa4.79□□□□□ -1.64
SNHG1-204ENST00000537068 A0A0A6YYD5 115 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 IQANK1A0A1B0GTG1 560 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 C2orf92A0A1B0GVN3 265 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 A0A1W2PR48 441 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 CCDC189A1A4V9 331 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 FAM159BA6NKW6 160 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 CAPN14A8MX76 684 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 CXorf49A8MYA2 514 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 K7EPI3 171 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 FOXE1O00358 373 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 TP53I11O14683 189 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 PHGDHO43175 533 aaKnown RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 DYRK3O43781 588 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 TMPRSS11DO60235 418 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 CCNT2O60583 730 aaKnown RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 UGDHO60701 494 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 DNAJA2O60884 412 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 CDH16O75309 829 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 PRKRAO75569 313 aaKnown RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 PIAS1O75925 651 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 RCBTB2O95199 551 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 HTR3BO95264 441 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 ACSL3O95573 720 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 ACTL6AO96019 429 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 INHBBP09529 407 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 CT62P0C5K7 136 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 STMN1P16949 149 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 TCP1P17987 556 aaKnown RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 PTX3P26022 381 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 PTPN6P29350 595 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 SSTR1P30872 391 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 TLX1P31314 330 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 PTGDSP41222 190 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 BUD31P41223 144 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 SSR2P43308 183 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 SLCO1A2P46721 670 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 RPL21P46778 160 aaKnown RBP4.78□□□□□ -1.64
SNHG1-204ENST00000537068 TRPC1P48995 793 aa4.78□□□□□ -1.64
SNHG1-204ENST00000537068 DGKQP52824 942 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms