RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 JMJD1CQ15652 2540 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 FLNAP21333 2647 aaKnown RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 IGLV3-10A0A075B6K4 115 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ILVBLA1L0T0 632 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TMEM110-MUSTN1A8MSY1 372 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 A8MU76 341 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 CTSVO60911 334 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 PIGNO95427 931 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 SLC2A3P11169 496 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 CCNB1P14635 433 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ANXA7P20073 488 aaKnown RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 CHMP24386 653 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ACADSBP45954 432 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TERF1P54274 439 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 KIAA1024LP59773 190 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 YWHAEP62258 255 aaKnown RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 GAGE5Q13069 117 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 GAGE6Q13070 117 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 CLPPQ16740 277 aaPredicted RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 MRGPRG-AS1Q2M3A8 158 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ASTE1Q2TB18 679 aaPredicted RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TMEM52BQ4KMG9 183 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 RAB6CQ53S08 254 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 RESP18Q5W5W9 173 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TMEM198Q66K66 360 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 PLXDC2Q6UX71 529 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 CEACAM20Q6UY09 585 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 PIWIL4Q7Z3Z4 852 aaKnown RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TMEM110Q86TL2 294 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 APLFQ8IW19 511 aaPredicted RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 SLC34A3Q8N130 599 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 OR2AP1Q8NGE2 309 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 KIAA1524Q8TCG1 905 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ISG20Q96AZ6 181 aaKnown RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF501Q96CX3 271 aaPredicted RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 MPP4Q96JB8 637 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF354BQ96LW1 612 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 CPXM1Q96SM3 734 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 RUFY1Q96T51 708 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TRIM62Q9BVG3 475 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 RAB6CQ9H0N0 254 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 THAP9Q9H5L6 903 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 TFB2MQ9H5Q4 396 aaKnown RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.9□□□□□ -1.63
CLIP1-207ENST00000536634 ENTPD4Q9Y227 616 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 MYO7BQ6PIF6 2116 aa4.9□□□□□ -1.63
CLIP1-207ENST00000536634 COL6A5A8TX70 2615 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 A6NCN8 305 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 FAM72CH0Y354 149 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 HSF2BPO75031 334 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 GSRP00390 522 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 PRSS1P07477 247 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 EPB41P11171 864 aaKnown RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 PAX1P15863 534 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 CDH2P19022 906 aaPredicted RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 TNFAIP3P21580 790 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 HRH2P25021 359 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 HNRNPH3P31942 346 aaKnown RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 MMP12P39900 470 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 RPS18P62269 152 aaKnown RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 GNA12Q03113 381 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SPOCK1Q08629 439 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 ZRANB3Q5FWF4 1079 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 FAM72AQ5TYM5 149 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 ACSM2BQ68CK6 577 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 FAM72DQ6L9T8 149 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 CFAP77Q6ZQR2 320 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 FAM183BPQ6ZVS7 135 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 ARHGAP22Q7Z5H3 698 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 FAM72BQ86X60 149 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 CEP57L1Q8IYX8 460 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 WDTC1Q8N5D0 677 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SLC5A8Q8N695 610 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 EMC1Q8N766 993 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 TRPC4APQ8TEL6 797 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SLC35C1Q96A29 364 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF524Q96C55 264 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SNRNP40Q96DI7 357 aaKnown RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SCRN2Q96FV2 425 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 OXNAD1Q96HP4 312 aaPredicted RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 LURAP1Q96LR2 239 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 GFI1Q99684 422 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SLC25A23Q9BV35 468 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 ULBP3Q9BZM4 244 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 UPF2Q9HAU5 1272 aaKnown RBP4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 FBXO8Q9NRD0 319 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 MOSPD1Q9UJG1 213 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 TCF19Q9Y242 345 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 CUBNO60494 3623 aa4.89□□□□□ -1.63
CLIP1-207ENST00000536634 SPTBP11277 2137 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 A0A087X0M5 115 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 A0A1B0GX30 115 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 FAM170AA1A519 330 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 TSPAN11A1L157 253 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 ANKUB1A6NFN9 424 aa4.88□□□□□ -1.63
CLIP1-207ENST00000536634 ARGFXA6NJG6 315 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms