RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 OR7G1Q8NGA0 311 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 OR52N2Q8NGI0 321 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 FAM76AQ8TAV0 307 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 SLC22A8Q8TCC7 542 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 GFM2Q969S9 779 aaKnown RBP12.13□□□□□ -0.47
PRKDC-206ENST00000536429 SGCZQ96LD1 299 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 NXF5Q9H1B4 397 aaKnown RBP12.13□□□□□ -0.47
PRKDC-206ENST00000536429 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 MYNNQ9NPC7 610 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 C1orf109Q9NX04 203 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 BCAP29Q9UHQ4 241 aa12.13□□□□□ -0.47
PRKDC-206ENST00000536429 CHCHD2Q9Y6H1 151 aaPredicted RBP12.13□□□□□ -0.47
PRKDC-206ENST00000536429 TRGV8A0A0C4DH27 118 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 A1L4Q6 167 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 TFECO14948 347 aaPredicted RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 RGS14O43566 566 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 SLC19A2O60779 497 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 PDE9AO76083 593 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 GLSO94925 669 aaPredicted RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 JUNP05412 331 aaKnown RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 SDC1P18827 310 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 CNR1P21554 472 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 EMDP50402 254 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 FBXW4P57775 412 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 RPL38P63173 70 aaKnown RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 C3AR1Q16581 482 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 GALNTL6Q49A17 601 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF385BQ569K4 471 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 BICRALQ6AI39 1079 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 POGLUT1Q8NBL1 392 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 FAM13CQ8NE31 585 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 OR7G2Q8NG99 324 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 CLHC1Q8NHS4 586 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF675Q8TD23 568 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 PAQR8Q8TEZ7 354 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 PGM2Q96G03 612 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 TTTY12Q9BZ98 90 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 C20orf27Q9GZN8 174 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 DEFB127Q9H1M4 99 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 EML4Q9HC35 981 aaKnown RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 SSU72Q9NP77 194 aaKnown RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 KCNK9Q9NPC2 374 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 SACM1LQ9NTJ5 587 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 TUBA8Q9NY65 449 aaPredicted RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 EHD3Q9NZN3 535 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 BAIAP2L1Q9UHR4 511 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 TINAGQ9UJW2 476 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 CNOT11Q9UKZ1 510 aaKnown RBP12.12□□□□□ -0.47
PRKDC-206ENST00000536429 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
PRKDC-206ENST00000536429 DIDO1Q9BTC0 2240 aaKnown RBP12.11□□□□□ -0.47
PRKDC-206ENST00000536429 ATP6AP2A0A1C7CYW4 349 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 MYO1GB0I1T2 1018 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 AKAP10O43572 662 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
PRKDC-206ENST00000536429 ATP6AP2O75787 350 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 CHEK2O96017 543 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 P04436 131 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 CELA3AP09093 270 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 NEFHP12036 1026 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 BGNP21810 368 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 SERPINB5P36952 375 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 GSTM5P46439 218 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 PPIAP62937 165 aaKnown RBP12.11□□□□□ -0.47
PRKDC-206ENST00000536429 NTRK2Q16620 822 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 KRTCAP3Q53RY4 240 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 XKR7Q5GH72 579 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 HLA-DQA1Q5Y7H0 255 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 FAM47EQ6ZV65 393 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 TAGAPQ8N103 731 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 TMEM251Q8N6I4 163 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 NUDT8Q8WV74 236 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 TP53INP1Q96A56 240 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 TSSK3Q96PN8 268 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 BBS4Q96RK4 519 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 GLIPR2Q9H4G4 154 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 MIEF1Q9NQG6 463 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 ZNF835Q9Y2P0 537 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 NPFFR2Q9Y5X5 522 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 ACTL7BQ9Y614 415 aa12.11□□□□□ -0.47
PRKDC-206ENST00000536429 A0A1B0GTH9 108 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 LRRC3CA6NJW4 275 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 TM9SF1O15321 606 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 CDC40O60508 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRKDC-206ENST00000536429 ZG16O60844 167 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 PEX11AO75192 247 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 CLDN1O95832 211 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 SERPINE1P05121 402 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 BCKDHAP12694 445 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 ABCD3P28288 659 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 MC3RP41968 323 aa12.1□□□□□ -0.47
PRKDC-206ENST00000536429 CA7P43166 264 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms