RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CAMK1GQ96NX5 476 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 WDFY2Q96P53 400 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 AICDAQ9GZX7 198 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 SNTG1Q9NSN8 517 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 MRPS18AQ9NVS2 196 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 PCDHGA4Q9Y5G9 962 aa15.12■□□□□ 0.01
CHMP1A-202ENST00000535997 IQCMA0A1B0GVH7 501 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 SNTNA6NMZ2 147 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 WASHC1A8K0Z3 465 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 PCDH8O95206 1070 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 EPPINO95925 133 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 ARFIP1P53367 373 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 PRKAG1P54619 331 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 SLAMF1Q13291 335 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 AGERQ15109 404 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 GPR19Q15760 415 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 MLF2Q15773 248 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 CARTPTQ16568 116 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 LRIT3Q3SXY7 679 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 LIPKQ5VXJ0 399 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 ACSM5Q6NUN0 579 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 WASH2PQ6VEQ5 465 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 TMPRSS11AQ6ZMR5 421 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 IQCHQ86VS3 1027 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 FGF11Q92914 225 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 SMARCD2Q92925 531 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 MOAP1Q96BY2 351 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 C12orf66Q96MD2 445 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 ZNF582Q96NG8 517 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 ASB16Q96NS5 453 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 PINK1Q9BXM7 581 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 C14orf119Q9NWQ9 140 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 FBXL12Q9NXK8 326 aa15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 THAP10Q9P2Z0 257 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-202ENST00000535997 HMGN2P05204 90 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 CHRM4P08173 479 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 CPEP16870 476 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 DRD3P35462 400 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 MAN2A2P49641 1150 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 SNAPC1Q16533 368 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 C3orf38Q5JPI3 329 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 OR8H2Q8N162 312 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 OR2A14Q96R47 310 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 GPA33Q99795 319 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 KLHL31Q9H511 634 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 WDR26Q9H7D7 661 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 NPAP1Q9NZP6 1156 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 RWDD3Q9Y3V2 267 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 ASB4Q9Y574 426 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 IRGMA1A4Y4 181 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 GLOD5A6NK44 160 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 WWP2O00308 870 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 ERAL1O75616 437 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 IL1AP01583 271 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 HIST1H1TP22492 207 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 TEAD1P28347 426 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 BUD31P41223 144 aaPredicted RBP15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 PAQR6Q6TCH4 344 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 OR2L8Q8NGY9 312 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 ASB15Q8WXK1 588 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 NR4A3Q92570 626 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 SLC25A46Q96AG3 418 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 MS4A6EQ96DS6 147 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 TRMT61AQ96FX7 289 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 PRDM7Q9NQW5 492 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 MBNL1Q9NR56 388 aaKnown RBP15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 OR1A2Q9Y585 309 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 PCDHGB2Q9Y5G2 931 aa15.1■□□□□ 0.01
CHMP1A-202ENST00000535997 A0A1W2PR48 441 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 PGRMC2O15173 223 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 FHP07954 510 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 MYL12AP19105 171 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 IFNGR2P38484 337 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ETV5P41161 510 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 CASP3P42574 277 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ETV1P50549 477 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 RAB40BQ12829 278 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 HYAL2Q12891 473 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 LASP1Q14847 261 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 PDGFRLQ15198 375 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 BCL2A1Q16548 175 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 AGAP6Q5VW22 663 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 MRM1Q6IN84 353 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ABHD17CQ6PCB6 329 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 CCDC116Q8IYX3 515 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ACOT4Q8N9L9 421 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 OR56A1Q8NGH5 318 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 CNRIP1Q96F85 164 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 AGAP4Q96P64 663 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 CTRCQ99895 268 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 MOV10Q9HCE1 1003 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 ZDHHC4Q9NPG8 344 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 TXNL4BQ9NX01 149 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 MUTYHQ9UIF7 546 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 POU2F3Q9UKI9 436 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 FBXW2Q9UKT8 454 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 V9GYH0 126 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 COL4A3Q01955 1670 aa15.09■□□□□ 0.01
CHMP1A-202ENST00000535997 H3BQ06 376 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms