RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SLC30A4O14863 429 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SUV39H1O43463 412 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 FOXS1O43638 330 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PRICKLE3O43900 615 aaPredicted RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 SLC19A2O60779 497 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 WBP4O75554 376 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 CCNB2O95067 398 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 EBLN1P0CF75 366 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 ODC1P11926 461 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PEPDP12955 493 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PKMP14618 531 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 ZNF30P17039 623 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 NAGAP17050 411 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 DDX5P17844 614 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 TNNI3P19429 210 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 EN2P19622 333 aaPredicted RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 PRPS1L1P21108 318 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 UQCRC1P31930 480 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 KDELR2P33947 212 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 CD86P42081 329 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 RFX2P48378 723 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PGGT1BP53609 377 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 CLDN8P56748 225 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 RRAS2P62070 204 aaPredicted RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 RPS14P62263 151 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 RPL38P63173 70 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 FAM189BP81408 668 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 IL10RBQ08334 325 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 ST3GAL4Q11206 333 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PPIGQ13427 754 aaKnown RBP eCLIP6.24□□□□□ -1.41
USP28-202ENST00000535607 GTF2H2Q13888 395 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 CAMK1Q14012 370 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 IRF3Q14653 427 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 GPNMBQ14956 572 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 KIAA0040Q15053 153 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SF3A2Q15428 464 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 TSC22D1Q15714 1073 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 TSTQ16762 297 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 DUOXA1Q1HG43 343 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 WSCD2Q2TBF2 565 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SETMARQ53H47 684 aaPredicted RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 ZNF789Q5FWF6 425 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SIRPB2Q5JXA9 342 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 CDKL4Q5MAI5 379 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 LYPLAL1Q5VWZ2 237 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PLAG1Q6DJT9 500 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 GTF2H2CQ6P1K8 395 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 MSANTD2Q6P1R3 559 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 C19orf48Q6RUI8 117 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 KLHL17Q6TDP4 642 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 TMEM179BQ7Z7N9 219 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 METTL23Q86XA0 190 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SLC30A8Q8IWU4 369 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 ARHGAP12Q8IWW6 846 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 GPALPP1Q8IXQ4 340 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SLC38A6Q8IZM9 456 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 CYP4Z2PQ8N1L4 340 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 UMODL1-AS1Q8N2C9 162 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 GHDCQ8N2G8 530 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 LIX1Q8N485 282 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 FAM86B1Q8N7N1 296 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 IL17RCQ8NAC3 791 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 DUSP18Q8NEJ0 188 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 DBF4BQ8NFT6 615 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 OR10H5Q8NGA6 315 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 OR4A15Q8NGL6 344 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 OR2T11Q8NH01 316 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 WDR36Q8NI36 951 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 CSGALNACT1Q8TDX6 532 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 KCNJ9Q92806 393 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 DNASE1L2Q92874 299 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 TESCQ96BS2 214 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 PYCR2Q96C36 320 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 MTERF3Q96E29 417 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 DIRAS2Q96HU8 199 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 EGLN2Q96KS0 407 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 B3GALT6Q96L58 329 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 DCLRE1CQ96SD1 692 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 MED18Q9BUE0 208 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 ZSCAN5AQ9BUG6 496 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 CNPPD1Q9BV87 410 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 SLC39A8Q9C0K1 460 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 MTIF3Q9H2K0 278 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 ABCB8Q9NUT2 735 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 NLE1Q9NVX2 485 aaPredicted RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 RBFOX1Q9NWB1 397 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 TAS2R7Q9NYW3 318 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 GALPQ9UBC7 116 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 UBQLN2Q9UHD9 624 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 ZNF490Q9ULM2 529 aaPredicted RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 PADI2Q9Y2J8 665 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 RPL36Q9Y3U8 105 aaKnown RBP6.24□□□□□ -1.41
USP28-202ENST00000535607 CSNK1G3Q9Y6M4 447 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 MYLKQ15746 1914 aa6.24□□□□□ -1.41
USP28-202ENST00000535607 TRBV5-3A0A0A0MS03 114 aa6.23□□□□□ -1.41
USP28-202ENST00000535607 SMIM28A0A1B0GU29 152 aa6.23□□□□□ -1.41
USP28-202ENST00000535607 A0A1B0GVI7 797 aa6.23□□□□□ -1.41
USP28-202ENST00000535607 HYKKA2RU49 373 aa6.23□□□□□ -1.41
USP28-202ENST00000535607 ARRDC5A6NEK1 342 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms