RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FHL5Q5TD97 284 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 OPN5Q6U736 354 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 GALNTL5Q7Z4T8 443 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 WDR75Q8IWA0 830 aaKnown RBP21■□□□□ 0.95
SFSWAP-204ENST00000535399 TMEM178AQ8NBL3 297 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 OR7G2Q8NG99 324 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 SLC22A8Q8TCC7 542 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 TP53INP1Q96A56 240 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 TMEM125Q96AQ2 219 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 CIDECQ96AQ7 238 aaPredicted RBP21■□□□□ 0.95
SFSWAP-204ENST00000535399 MTERF3Q96E29 417 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 NOP53Q9NZM5 478 aaKnown RBP21■□□□□ 0.95
SFSWAP-204ENST00000535399 SH3BP4Q9P0V3 963 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 ERVK-11Q9UQG0 969 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 CFL2Q9Y281 166 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 SCAMP2O15127 329 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 PDPK1O15530 556 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 VPS4BO75351 444 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 KITP10721 976 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 HPCAL1P37235 193 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 FRKP42685 505 aaPredicted RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 NR0B1P51843 470 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 PMP22Q01453 160 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 ZNF324BQ6AW86 544 aaPredicted RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 FAM180AQ6UWF9 173 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 LARP4Q71RC2 724 aaKnown RBP eCLIP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 R3HCC1LQ7Z5L2 792 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 LRRC34Q8IZ02 419 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 BCORP1Q8N888 145 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 C17orf47Q8NEP4 570 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 FAR1Q8WVX9 515 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 ITPAQ9BY32 194 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 RYDENQ9NUL5 291 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 INTS9Q9NV88 658 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 PRODH2Q9UF12 536 aa20.99■□□□□ 0.95
SFSWAP-204ENST00000535399 ASPDHA6ND91 283 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 SLCO1B7G3V0H7 640 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 PLOD2O00469 737 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 BCAS2O75934 225 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 SLITRK5O94991 958 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 FBXO45P0C2W1 286 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 LBPP18428 481 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 DIO3P55073 304 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 HLA-DQA1Q5Y7H0 255 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 ZNF551Q7Z340 670 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 RIMKLAQ8IXN7 391 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 GALNT11Q8NCW6 608 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 OR7A2PQ8NGA2 310 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 LRRC8CQ8TDW0 803 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 NUDT8Q8WV74 236 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 SGCZQ96LD1 299 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 NXF5Q9H1B4 397 aaKnown RBP20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 TIMMDC1Q9NPL8 285 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 AGPAT4Q9NRZ5 378 aa20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 KLF13Q9Y2Y9 288 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 RP1L1Q8IWN7 2480 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-204ENST00000535399 SHANK1Q9Y566 2161 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 A0A087WV62 115 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 TCP11X1B4DZS4 312 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 WISP1O95388 367 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 RPL3P39023 403 aaKnown RBP20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 MC3RP41968 323 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 CLDN8P56748 225 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 C21orf58P58505 322 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 OGFOD2Q6N063 350 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 TMEM107Q6UX40 140 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 TMEM64Q6YI46 380 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 RTL4Q6ZR62 310 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 MAVSQ7Z434 540 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 TAGAPQ8N103 731 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 KRTCAP2Q8N6L1 136 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 GOLM1Q8NBJ4 401 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 PSD4Q8NDX1 1056 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 DNAJB8Q8NHS0 232 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 SPACA9Q96E40 222 aaPredicted RBP20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 C7orf26Q96N11 449 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 SH2D2AQ9NP31 389 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 SLCO1B3Q9NPD5 702 aa20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 ACSS1Q9NUB1 689 aaPredicted RBP20.97■□□□□ 0.95
SFSWAP-204ENST00000535399 TRPC5OSA6NMA1 111 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 ZNF195O14628 629 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 NME6O75414 186 aaPredicted RBP20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 IFI6P09912 130 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 LAMP1P11279 417 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 DDX5P17844 614 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 PRPS1L1P21108 318 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 ATCAYQ86WG3 371 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 SULF2Q8IWU5 870 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 OR2L13Q8N349 312 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 PIWIL2Q8TC59 973 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 DYDC1Q8WWB3 177 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 NR4A3Q92570 626 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 COQ8BQ96D53 544 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 ELP4Q96EB1 424 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 ZBED6CLQ96FA7 236 aaPredicted RBP20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 VSTM2LQ96N03 204 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 FRMD6Q96NE9 622 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 SLX1AQ9BQ83 275 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 WDR55Q9H6Y2 383 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms