RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	ABHD5	Q8WTS1	349 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	S100A16	Q96FQ6	103 aa	Known RBP	14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	UBE2Z	Q9H832	354 aa	Predicted RBP	14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	SGK494	L7N484	410 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CD46	P15529	392 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	RHCE	P18577	417 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PRKACG	P22612	351 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PAX7	P23759	505 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	RBM34	P42696	430 aa	Known RBP	14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CLCN2	P51788	898 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	PAQR7	Q86WK9	346 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	KLHL42	Q9P2K6	505 aa		14.96	□□□□□ -0.01
NCAPD3-213	ENST00000534532	CLPX	O76031	633 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	THBS2	P35442	1172 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ADAM17	P78536	824 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CDKL1	Q00532	357 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	POU4F2	Q12837	409 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MELK	Q14680	651 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MANEA	Q5SRI9	462 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	C3orf33	Q6P1S2	294 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TIGD4	Q8IY51	512 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	VWA5B2	Q8N398	1253 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TOMM5	Q8N4H5	51 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	BOLL	Q8N9W6	283 aa	Known RBP	14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PROKR1	Q8TCW9	393 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NEDD4L	Q96PU5	975 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GPN2	Q9H9Y4	310 aa	Predicted RBP	14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	VNN3	Q9NY84	501 aa		14.96	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CHD4	Q14839	1912 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CCNK	O75909	580 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PEPD	P12955	493 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ABO	P16442	354 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PYHIN1	Q6K0P9	492 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF551	Q7Z340	670 aa	Predicted RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RHBDF1	Q96CC6	855 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KCNK12	Q9HB15	430 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	URB1	O60287	2271 aa	Known RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MRPL3	P09001	348 aa	Known RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TSC22D1	Q15714	1073 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	IER5L	Q5T953	404 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	LRFN4	Q6PJG9	635 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR7G3	Q8NG95	312 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CD200R1	Q8TD46	325 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ELP5	Q8TE02	316 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SEC14L4	Q9UDX3	406 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	BAIAP2	Q9UQB8	552 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SDK1	Q7Z5N4	2213 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FLRT2	O43155	660 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	EED	O75530	441 aa	Known RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	UBE2Q1	Q7Z7E8	422 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ISCA2	Q86U28	154 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR2T4	Q8NH00	348 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ULBP3	Q9BZM4	244 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	GAREM1	Q9H706	876 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	AASS	Q9UDR5	926 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CLEC4E	Q9ULY5	219 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NENF	Q9UMX5	172 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DHDH	Q9UQ10	334 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TYROBP	O43914	113 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OXSR1	O95747	527 aa	Predicted RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MYOG	P15173	224 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NDUFV2	P19404	249 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HTR1E	P28566	365 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RIDA	P52758	137 aa	Known RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	CWF19L1	Q69YN2	538 aa	Known RBP	14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OPN5	Q6U736	354 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR52N2	Q8NGI0	321 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	OR8S1	Q8NH09	359 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TRPV4	Q9HBA0	871 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KLHL21	Q9UJP4	597 aa		14.95	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ANKRD28	O15084	1053 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZFAND5	O76080	213 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TGFBR3	Q03167	851 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	FRS2	Q8WU20	508 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KCNN1	Q92952	543 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	L3HYPDH	Q96EM0	354 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PRSS16	Q9NQE7	514 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ERVK-18	Q9QC07	812 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TMEM265	A0A087WTH1	108 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PHYH	O14832	338 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SRPX2	O60687	465 aa	Predicted RBP	14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	F11	P03951	625 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SLC2A2	P11168	524 aa	Predicted RBP	14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	SOX2	P48431	317 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	MLLT10	P55197	1068 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF252P-AS1	Q0IIN9	211 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	ZNF615	Q8N8J6	731 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	URM1	Q9BTM9	101 aa	Known RBP	14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RDH14	Q9HBH5	336 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	NKAPL	Q5M9Q1	402 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	KANK2	Q63ZY3	851 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	VASH1	Q7L8A9	365 aa	Predicted RBP	14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HMGN2P46	Q86SG4	172 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	DENND6B	Q8NEG7	585 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	HOXB13	Q92826	284 aa	Predicted RBP	14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TMEM19	Q96HH6	336 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	RXFP3	Q9NSD7	469 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	PCDHGA3	Q9Y5H0	932 aa		14.94	□□□□□ -0.02
NCAPD3-213	ENST00000534532	TRAPPC13	A5PLN9	417 aa		14.94	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms