RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZNF597Q96LX8 424 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 ITPAQ9BY32 194 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 SHCBP1LQ9BZQ2 653 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 NXF5Q9H1B4 397 aaKnown RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 SLC6A15Q9H2J7 730 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 C12orf65Q9H3J6 166 aaKnown RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 GSTO2Q9H4Y5 243 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 SH2D2AQ9NP31 389 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 ZFP64Q9NPA5 681 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 MAT2BQ9NZL9 334 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CNIH4Q9P003 139 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 HEY2Q9UBP5 337 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 B4GALT7Q9UBV7 327 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 MCM8Q9UJA3 840 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CES1P1Q9UKY3 287 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CNOT11Q9UKZ1 510 aaKnown RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 DTX4Q9Y2E6 619 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 DLGAP4Q9Y2H0 992 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 NPFFR2Q9Y5X5 522 aa9.6□□□□□ -0.87
CAPN1-225ENST00000533704 CHCHD2Q9Y6H1 151 aaPredicted RBP9.6□□□□□ -0.87
CAPN1-225ENST00000533704 TLDC2A0PJX2 215 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 LRRC3CA6NJW4 275 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 FIGNL2A6NMB9 653 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 G3V2L1 256 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 COPEO14579 308 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 BCKDKO14874 412 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 TRAPPC6AO75865 159 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 IGHG3P01860 377 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 PROCP04070 461 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 PCSK2P16519 638 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 GPX3P22352 226 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 ACVR2AP27037 513 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 TIA1P31483 386 aaKnown RBP eCLIP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 CCT5P48643 541 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 NAGLUP54802 743 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 FOXA1P55317 472 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 NUP107P57740 925 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 TRA2BP62995 288 aaKnown RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 RAE1P78406 368 aaKnown RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 MRPS35P82673 323 aaKnown RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 PRICKLE4Q2TBC4 344 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 SPIN4Q56A73 249 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 WLSQ5T9L3 541 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 TMEM198Q66K66 360 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 GDF7Q7Z4P5 450 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 CCDC116Q8IYX3 515 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 LRRC25Q8N386 305 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 GBP7Q8N8V2 638 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 SIMC1Q8NDZ2 872 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 OR52R1Q8NGF1 315 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 KAT2AQ92830 837 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 ADIPOR1Q96A54 375 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 TP53INP1Q96A56 240 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 SARAFQ96BY9 339 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 CNRIP1Q96F85 164 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 ZNF703Q9H7S9 590 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-225ENST00000533704 METTL7AQ9H8H3 244 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 GIMAP4Q9NUV9 329 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 EHD3Q9NZN3 535 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 GRID1Q9ULK0 1009 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 RNF6Q9Y252 685 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 CFL2Q9Y281 166 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 PLLPQ9Y342 182 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 LRBAP50851 2863 aa9.59□□□□□ -0.87
CAPN1-225ENST00000533704 APCP25054 2843 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 C15orf38-AP3S2A0A0A6YYH1 394 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 NKX2-6A6NCS4 301 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 OR14I1A6ND48 311 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 AQP7O14520 342 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 UBFD1O14562 309 aaKnown RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 GNB5O14775 395 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 PLIN3O60664 434 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 NME6O75414 186 aaPredicted RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 CBX7O95931 251 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 ATP1B1P05026 303 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 ANXA4P09525 319 aaPredicted RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 CPA3P15088 417 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 S1PR1P21453 382 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 ABCD3P28288 659 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 CRHR1P34998 444 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 KIR3DL1P43629 444 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 RPP38P78345 283 aaKnown RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 C2orf80Q0P641 193 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 PLCXD2Q0VAA5 305 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 MGAT2Q10469 447 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 MAP4K2Q12851 820 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 DUSP8Q13202 625 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 HYAL4Q2M3T9 481 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 CCDC153Q494R4 210 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 TRMT12Q53H54 448 aaKnown RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 DESI1Q6ICB0 168 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 MEX3BQ6ZN04 569 aaKnown RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 FRMD7Q6ZUT3 714 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 ACAD11Q709F0 780 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 LURAP1LQ8IV03 231 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms