RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ORAI3Q9BRQ5 295 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 NMNAT1Q9HAN9 279 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 SRA1Q9HD15 236 aaKnown RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 C14orf119Q9NWQ9 140 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 IL20RAQ9UHF4 553 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 PCDHGB6Q9Y5F9 930 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ANKRD36CQ5JPF3 1778 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 LRP5O75197 1615 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 FBP2O00757 339 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 SOX30O94993 753 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 PRLP01236 227 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 PCGF2P35227 344 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 CDK5R2Q13319 367 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 MICAQ29983 383 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 TCEAL6Q6IPX3 200 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 TMPRSS9Q7Z410 1059 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 GPAT4Q86UL3 456 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 RETREG3Q86VR2 466 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 DCP2Q8IU60 420 aaKnown RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 SLC37A3Q8NCC5 494 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF597Q96LX8 424 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 MACROD1Q9BQ69 325 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 UCKL1Q9NWZ5 548 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 TAS2R10Q9NYW0 307 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF224Q9NZL3 707 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ZNF639Q9UID6 485 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 SPARCP09486 303 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 OSMP13725 252 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 AK4P27144 223 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 ALG1LQ6GMV1 187 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 CEACAM19Q7Z692 300 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 KLBQ86Z14 1044 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 IQCF1Q8N6M8 205 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 CCDC107Q8WV48 283 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 BIRC8Q96P09 236 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 WDR83Q9BRX9 315 aaKnown RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 HCN2Q9UL51 889 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 GPR52Q9Y2T5 361 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 C5orf51A6NDU8 294 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 CLCA1A8K7I4 914 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 HIDE1A8MVS5 230 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 GATBO75879 557 aaKnown RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 C1SP09871 688 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 CPOXP36551 454 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 MTNR1AP48039 350 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 AP2S1P53680 142 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 MFSD2AQ8NA29 543 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 DENND6BQ8NEG7 585 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 SGTBQ96EQ0 304 aa16.68■□□□□ 0.26
PHRF1-205ENST00000533464 PELOQ9BRX2 385 aaKnown RBP16.68■□□□□ 0.26
PHRF1-205ENST00000533464 HYKKA2RU49 373 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 LILRB3O75022 631 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 SEC23BQ15437 767 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 INAVAQ3KP66 663 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 OR2A12Q8NGT7 310 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 OR2L2Q8NH16 312 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 CLMPQ9H6B4 373 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 GORASP2Q9H8Y8 452 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 GXYLT2A0PJZ3 443 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 SLC22A31A6NKX4 558 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 DUX1O43812 170 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 YES1P07947 543 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 GNAO1P09471 354 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 CLDN2P57739 230 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 ACTC1P68032 377 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 ACTA1P68133 377 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 GAS6Q14393 721 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 PROX2Q3B8N5 592 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 GAREM2Q75VX8 874 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 PHOX2BQ99453 314 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 RIMS3Q9UJD0 308 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 ADORA3P0DMS8 318 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 ACVR1BP36896 505 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 MC3RP41968 323 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 PRLHRP49683 370 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 PNCKQ6P2M8 343 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 RFLNAQ6ZTI6 216 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 PAQR7Q86WK9 346 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 TMIEQ8NEW7 156 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 DNMT3BQ9UBC3 853 aaKnown RBP16.67■□□□□ 0.26
PHRF1-205ENST00000533464 CA14Q9ULX7 337 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 HS3ST2Q9Y278 367 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 OR14I1A6ND48 311 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 SNTA1Q13424 505 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 PGM2L1Q6PCE3 622 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 RTN4RL1Q86UN2 441 aaPredicted RBP16.67■□□□□ 0.26
PHRF1-205ENST00000533464 RASGEF1AQ8N9B8 481 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 HDHD5Q9BXW7 423 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 BEX2Q9BXY8 128 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 SLC6A16Q9GZN6 736 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 BEX1Q9HBH7 125 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 SMURF1Q9HCE7 757 aa16.67■□□□□ 0.26
PHRF1-205ENST00000533464 SH3D21A4FU49 640 aa16.66■□□□□ 0.26
PHRF1-205ENST00000533464 PEX12O00623 359 aa16.66■□□□□ 0.26
PHRF1-205ENST00000533464 C1orf105O95561 183 aa16.66■□□□□ 0.26
PHRF1-205ENST00000533464 FBLP22087 321 aaKnown RBP16.66■□□□□ 0.26
PHRF1-205ENST00000533464 GADD45AP24522 165 aa16.66■□□□□ 0.26
PHRF1-205ENST00000533464 RABIFP47224 123 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms