RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PPM1BO75688 479 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 KRT14P02533 472 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 FGGP02679 453 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 NAGAP17050 411 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 PGAM1P18669 254 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 TBXA2RP21731 343 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 ABCD3P28288 659 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 SSTR4P31391 388 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 CASP2P42575 452 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 SSR2P43308 183 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 HNRNPH2P55795 449 aaKnown RBP7.04□□□□□ -1.28
NXF1-215ENST00000533440 NRG3P56975 720 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 RPS13P62277 151 aaKnown RBP7.04□□□□□ -1.28
NXF1-215ENST00000533440 RPS4XP62701 263 aaKnown RBP7.04□□□□□ -1.28
NXF1-215ENST00000533440 SLAMF1Q13291 335 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 SNTA1Q13424 505 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 LAPTM5Q13571 262 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 TBCCQ15814 346 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 BCL2A1Q16548 175 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 KBTBD12Q3ZCT8 623 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 C6orf52Q5T4I8 152 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 TEDDM1Q5T9Z0 273 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 DEPDC1Q5TB30 811 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 HLA-DQA1Q5Y7H0 255 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 C18orf63Q68DL7 685 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 ANKRD34AQ69YU3 496 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 OR4C11Q6IEV9 310 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 ADAM5Q6NVV9 412 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 P4HA3Q7Z4N8 544 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 ADAMTSL2Q86TH1 951 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 GPR180Q86V85 440 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 IFNEQ86WN2 208 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 PRR22Q8IZ63 422 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 NKAPQ8N5F7 415 aaKnown RBP7.04□□□□□ -1.28
NXF1-215ENST00000533440 ZNF615Q8N8J6 731 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 NAT8LQ8N9F0 302 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 ZNF610Q8N9Z0 462 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 OR14L1PQ8NHC6 308 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 HGDQ93099 445 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 TRMT61AQ96FX7 289 aaKnown RBP7.04□□□□□ -1.28
NXF1-215ENST00000533440 NODALQ96S42 347 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 KRT12Q99456 494 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 TMEM79Q9BSE2 394 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 OSBPL11Q9BXB4 747 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 AMBRA1Q9C0C7 1298 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 PHACTR1Q9C0D0 580 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 SLCO5A1Q9H2Y9 848 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 METTL7AQ9H8H3 244 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 CXorf21Q9HAI6 301 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 GALNT9Q9HCQ5 603 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 SERHLQ9NQF3 203 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 DNAJC11Q9NVH1 559 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 TMEM160Q9NX00 188 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 SLC17A6Q9P2U8 582 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 HEY2Q9UBP5 337 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 PHF11Q9UIL8 331 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 LAMP3Q9UQV4 416 aa7.04□□□□□ -1.28
NXF1-215ENST00000533440 MRPS18CQ9Y3D5 142 aaKnown RBP7.04□□□□□ -1.28
NXF1-215ENST00000533440 A0A096LNT2 108 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 SLC22A20A6NK97 555 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TTC4O95801 387 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TGFB1P01137 390 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 CT62P0C5K7 136 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 DANCRP0C864 163 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 SLC35E2BP0CK96 405 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 SLC35E2P0CK97 266 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 PPP3CBP16298 524 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 EPORP19235 508 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 SRD5A2P31213 254 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TLX1P31314 330 aaPredicted RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 ACVR1BP36896 505 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 BUD31P41223 144 aaPredicted RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 KCNJ5P48544 419 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 OCRLQ01968 901 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 RUNX1T1Q06455 604 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 FGFBP1Q14512 234 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 GUSBP1Q15486 140 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TGFBIQ15582 683 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TSNQ15631 228 aaKnown RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 HIST2H2ACQ16777 129 aaPredicted RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 PAGE2BQ5JRK9 111 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 SPANXN3Q5MJ09 141 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 KHDRBS2Q5VWX1 349 aaKnown RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 HIST2H2AA3Q6FI13 130 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 DESI1Q6ICB0 168 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 MRM1Q6IN84 353 aaKnown RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 TTC27Q6P3X3 843 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 AAGABQ6PD74 315 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 FRA10AC1Q70Z53 315 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 NUP54Q7Z3B4 507 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TMEM139Q8IV31 216 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 LAS2Q8IYD9 372 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 TCAIMQ8N3R3 496 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 ZCCHC7Q8N3Z6 543 aaKnown RBP7.03□□□□□ -1.28
NXF1-215ENST00000533440 RNF214Q8ND24 703 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 RDH11Q8TC12 318 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 ANKRD49Q8WVL7 239 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 FIG4Q92562 907 aa7.03□□□□□ -1.28
NXF1-215ENST00000533440 AKAP1Q92667 903 aaKnown RBP eCLIP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms