RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 EDF1O60869 148 aaKnown RBP11.09□□□□□ -0.63
SSBP3-214ENST00000533209 NEURL1O76050 574 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 SLITRK5O94991 958 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 OR6B1O95007 311 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 TGDSO95455 350 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 EFNA1P20827 205 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-214ENST00000533209 GPX3P22352 226 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 RPL3P39023 403 aaKnown RBP11.09□□□□□ -0.63
SSBP3-214ENST00000533209 SOX3P41225 446 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 MC3RP41968 323 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 CYB561P49447 251 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 EMDP50402 254 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 OC90Q02509 493 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-214ENST00000533209 CPTPQ5TA50 214 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 SPINK14Q6IE38 97 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 LYPD8Q6UX82 237 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 TMEM156Q8N614 296 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 ZBED6CLQ96FA7 236 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-214ENST00000533209 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-214ENST00000533209 LRFN1Q9P244 771 aa11.09□□□□□ -0.63
SSBP3-214ENST00000533209 UPK1AO00322 258 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 DIAPH2O60879 1101 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 NME6O75414 186 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 SLC25A12O75746 678 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 IFI6P09912 130 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 DDX5P17844 614 aaKnown RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 IDH3AP50213 366 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 CDK9P50750 372 aaKnown RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 NR0B1P51843 470 aaKnown RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 MANFP55145 182 aaKnown RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 HSPB3Q12988 150 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 LSM12Q3MHD2 195 aaKnown RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 HLA-DQA1Q5Y7H0 255 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 TMEM198Q66K66 360 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 NXNQ6DKJ4 435 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 TMEM107Q6UX40 140 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 IL20RBQ6UXL0 311 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 PRICKLE2Q7Z3G6 844 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 GPALPP1Q8IXQ4 340 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 OR2L13Q8N349 312 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 SLC15A4Q8N697 577 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 HORMAD2Q8N7B1 307 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 C17orf47Q8NEP4 570 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 CEP70Q8NHQ1 597 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 ZFP28Q8NHY6 868 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 TP53INP1Q96A56 240 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 ELP4Q96EB1 424 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 SCMH1Q96GD3 660 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 TEX37Q96LM6 180 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 PRPF18Q99633 342 aaKnown RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 EBF4Q9BQW3 602 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 ITPAQ9BY32 194 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 HES7Q9BYE0 225 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 DPY30Q9C005 99 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 ATAD3AQ9NVI7 634 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 C19orf53Q9UNZ5 99 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-214ENST00000533209 MAPRE3Q9UPY8 281 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 CFL2Q9Y281 166 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 PCDHGB6Q9Y5F9 930 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 GPR45Q9Y5Y3 372 aa11.08□□□□□ -0.64
SSBP3-214ENST00000533209 A0A1W2PRB8 838 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 TTLL8A6PVC2 850 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 A8MVJ9 347 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 SLC28A2O43868 658 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 PSMG1O95456 288 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 SP1P08047 785 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 IL12AP29459 219 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 PPICP45877 212 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 AQP5P55064 265 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 MLLT10P55197 1068 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 UFM1P61960 85 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 GUCY1A3Q02108 690 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 MLC1Q15049 377 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 INPP5JQ15735 1006 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 PGS1Q32NB8 556 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 ZNF791Q3KP31 576 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 SLC25A25Q6KCM7 469 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 RPUSD3Q6P087 351 aaKnown RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 OPN5Q6U736 354 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 TMEM64Q6YI46 380 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 MDGA2Q7Z553 956 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 CISD2Q8N5K1 135 aaKnown RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 NATD1Q8N6N6 113 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 SLC22A8Q8TCC7 542 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 TESCQ96BS2 214 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 MAGED4Q96JG8 741 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 MARK4Q96L34 752 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 VSTM2LQ96N03 204 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 DUSP26Q9BV47 211 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 BHLHE41Q9C0J9 482 aaPredicted RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 CLMPQ9H6B4 373 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 FOLH1BQ9HBA9 442 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 KLHL1Q9NR64 748 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms