RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 M1APQ8TC57 530 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 TMEM125Q96AQ2 219 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 MMABQ96EY8 250 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 APIPQ96GX9 242 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 NSL1Q96IY1 281 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 SERPINI1Q99574 410 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR51B5Q9H339 312 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 MMP25Q9NPA2 562 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 ARL8BQ9NVJ2 186 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 CAPN7Q9Y6W3 813 aa10.51□□□□□ -0.73
TRAPPC4-213ENST00000533149 IGHV3-20A0A0C4DH32 117 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 OR2A25A4D2G3 310 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 PSMD12O00232 456 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 ARHGEF9O43307 516 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 T-ENOLP0DO92 83 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 GPX3P22352 226 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 PIK3R1P27986 724 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 SERPINB1P30740 379 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 CYB561P49447 251 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 ATP4BP51164 291 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 RPL38P63173 70 aaKnown RBP10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 MAD2L1Q13257 205 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 SQLEQ14534 574 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 GSTA3Q16772 222 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 PRTGQ2VWP7 1150 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 SLC25A35Q3KQZ1 300 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 DEPDC1Q5TB30 811 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 GARNL3Q5VVW2 1013 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 FBXW10Q5XX13 1052 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 PAOXQ6QHF9 649 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZC3H7AQ8IWR0 971 aaKnown RBP10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 RPRMLQ8N4K4 120 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 TTLQ8NG68 377 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 COX4I2Q96KJ9 171 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 NPAS2Q99743 824 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 ZFYVE21Q9BQ24 234 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 C1orf50Q9BV19 199 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 AIG1Q9NVV5 245 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 BEX4Q9NWD9 120 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 NMRK1Q9NWW6 199 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 CRIM1Q9NZV1 1036 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 EIF3LQ9Y262 564 aaKnown RBP10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 GPR45Q9Y5Y3 372 aa10.5□□□□□ -0.73
TRAPPC4-213ENST00000533149 LOC100653049A0A140TA62 436 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 KLRC4-KLRK1H3BQV0 150 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 SLC22A2O15244 555 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 MAN1A2O60476 641 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 CLEC3AO75596 197 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 KRT34O76011 436 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 SERPIND1P05546 499 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 IDO1P14902 403 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 AHRP35869 848 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 ST13P50502 369 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 NME5P56597 212 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 STX1BP61266 288 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 RPS15AP62244 130 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 IRX1P78414 480 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 RELAQ04206 551 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 TBL3Q12788 808 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 BNIP1Q12981 228 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 AGKQ53H12 422 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 KRTAP1-3Q8IUG1 177 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 MIER2Q8N344 545 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 CREB3L4Q8TEY5 395 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 FAM222BQ8WU58 562 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 THAP11Q96EK4 314 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 F2RL3Q96RI0 385 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 MS4A8Q9BY19 250 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 VN1R1Q9GZP7 353 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 ASIC5Q9NY37 505 aa10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 NOP53Q9NZM5 478 aaKnown RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 KLF13Q9Y2Y9 288 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 POLR3HQ9Y535 204 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC4-213ENST00000533149 COL6A5A8TX70 2615 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 H0YGG7 62 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 SAP18O00422 153 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TXNDC9O14530 226 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 HS6ST1O60243 411 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MYO1DO94832 1006 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 TBX6O95947 436 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 STATHP02808 62 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 G6PDP11413 515 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 PRPS2P11908 318 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 BCKDHAP12694 445 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 EZRP15311 586 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 ACVR2AP27037 513 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 GSTM2P28161 218 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MAPK1P28482 360 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MRPL19P49406 292 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 ARF3P61204 181 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 UFM1P61960 85 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 ACSM2AQ08AH3 577 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 CUL3Q13618 768 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 DAZAP2Q15038 168 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MINDY4Q4G0A6 757 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 FLYWCH1Q4VC44 716 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 CMPK2Q5EBM0 449 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 EMC4Q5J8M3 183 aa10.48□□□□□ -0.73
TRAPPC4-213ENST00000533149 MFSD4BQ5TF39 518 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms