RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 ZNF75CPQ92670 426 aaPredicted RBP12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 KAT2AQ92830 837 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 NTNG2Q96CW9 530 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 FRMD6Q96NE9 622 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 AMDHD1Q96NU7 426 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 MEAF6Q9HAF1 191 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 PROK2Q9HC23 129 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 ASIC5Q9NY37 505 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 ATP6V1HQ9UI12 483 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 FLNCQ14315 2725 aa12.87□□□□□ -0.35
TSPAN4-220ENST00000532375 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PINLYPA6NC86 204 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PLOD2O00469 737 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 SDHDO14521 159 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PSMG1O95456 288 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 FBXO45P0C2W1 286 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PRPS2P11908 318 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 GNLYP22749 145 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 MPIP34949 423 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 ASMTP46597 345 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 C21orf58P58505 322 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PTGR1Q14914 329 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 MAPKAPK3Q16644 382 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 OPN5Q6U736 354 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 TMEM64Q6YI46 380 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 SULF2Q8IWU5 870 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 LIX1Q8N485 282 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 TMEM178AQ8NBL3 297 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 C17orf47Q8NEP4 570 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 OR52R1Q8NGF1 315 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 NR4A3Q92570 626 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 ERP27Q96DN0 273 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 PPP1R36Q96LQ0 422 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 C5orf34Q96MH7 638 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 NXF5Q9H1B4 397 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 MIEF1Q9NQG6 463 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 ENTPD4Q9Y227 616 aa12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 GPR55Q9Y2T6 319 aaPredicted RBP12.86□□□□□ -0.35
TSPAN4-220ENST00000532375 A0A087WV62 115 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 A0A0G2JMM0 328 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 A0A1W2PPB8 328 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 A0A1W2PRS3 328 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 A8MVJ9 347 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 KIR3DP1A8MWS1 328 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 HMGB1P1B2RPK0 211 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ANKRD28O15084 1053 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 IFI6P09912 130 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 CT45A8P0DMV1 189 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 CT45A9P0DMV2 189 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 CCL3P10147 92 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 G6PDP11413 515 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 NR0B1P51843 470 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 DIO3P55073 304 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 NTRK2Q16620 822 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 CT45A2Q5DJT8 189 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ATG16L1Q676U5 607 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ZNF551Q7Z340 670 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 MAVSQ7Z434 540 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 LRRC34Q8IZ02 419 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 FAM9CQ8IZT9 166 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 KIRREL3Q8IZU9 778 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 CPSF7Q8N684 471 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 KRTCAP2Q8N6L1 136 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 FNDC5Q8NAU1 212 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ZFP62Q8NB50 900 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 GOLM1Q8NBJ4 401 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ST6GALNAC3Q8NDV1 305 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 PAQR8Q8TEZ7 354 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 COQ8BQ96D53 544 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 SPACA9Q96E40 222 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ELP4Q96EB1 424 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 SGCZQ96LD1 299 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 VSTM2LQ96N03 204 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 GAL3ST4Q96RP7 486 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 ITPAQ9BY32 194 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 PFDN4Q9NQP4 134 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 AGPAT4Q9NRZ5 378 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 GIMAP4Q9NUV9 329 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 HPF1Q9NWY4 346 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 NTMQ9P121 344 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 BCAP29Q9UHQ4 241 aa12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 C19orf53Q9UNZ5 99 aaPredicted RBP12.85□□□□□ -0.35
TSPAN4-220ENST00000532375 NCKAP5O14513 1909 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 ZNF407Q9C0G0 2248 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 UPK1AO00322 258 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 SCAMP2O15127 329 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms