RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TANKQ92844 425 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 FGF14Q92915 247 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 RTP4Q96DX8 246 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 NPLQ9BXD5 320 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 TOR3AQ9H497 397 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 LAMP5Q9UJQ1 280 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 NAALAD2Q9Y3Q0 740 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 METTL21EPA6NDL7 271 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SRPX2O60687 465 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 RLN2P04090 185 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SLC2A2P11168 524 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 FUT4P22083 530 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 GPR143P51810 404 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 EPHA4P54764 986 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 CWF19L1Q69YN2 538 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 ADAMTSL4Q6UY14 1074 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 FAM160A2Q8N612 972 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SGCDQ92629 289 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 PITHD1Q9GZP4 211 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 A0A1B0GVI7 797 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 VILLO15195 856 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 RNF144AP50876 292 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 CLCN2P51788 898 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 VMACQ2NL98 169 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 WSCD2Q2TBF2 565 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SEC14L1Q92503 715 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 DDIT4LQ96D03 193 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SCGB3A2Q96PL1 93 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 CCDC106Q9BWC9 280 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 WNT16Q9UBV4 365 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 EXOSC1Q9Y3B2 195 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 CHP2O43745 196 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SHQ1Q6PI26 577 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 TSSK4Q6SA08 328 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 TCEANCQ8N8B7 351 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 C19orf47Q8N9M1 422 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 DHRS1Q96LJ7 313 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 RDH12Q96NR8 316 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 DOHHQ9BU89 302 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 TUBA8Q9NY65 449 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 EIF3KQ9UBQ5 218 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 PADI1Q9ULC6 663 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 HHLA1C9JL84 531 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 MT-ND5P03915 603 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 PSKH1P11801 424 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 HTR1EP28566 365 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 NOVA1P51513 510 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 ADPRHP54922 357 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 HSD11B2P80365 405 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 DCDP81605 110 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 GRIK2Q13002 908 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 EFR3AQ14156 821 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 MRPL58Q14197 206 aaKnown RBP10.73□□□□□ -0.69
PTPRK-221ENST00000532331 CDKL4Q5MAI5 379 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF227Q86WZ6 799 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 ZSWIM9Q86XI8 627 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 TREML1Q86YW5 311 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 CD200R1Q8TD46 325 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 PMM1Q92871 262 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 HSPBAP1Q96EW2 488 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 SLC22A4Q9H015 551 aa10.73□□□□□ -0.69
PTPRK-221ENST00000532331 LOC285095A0A1B0GVY8 99 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 OR14I1A6ND48 311 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 FAAHO00519 579 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 MBTPS2O43462 519 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ITGA5P08648 1049 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 NDUFV2P19404 249 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 F8A1P23610 371 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 GDF1P27539 372 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 CNPY1Q3B7I2 92 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 C14orf28Q4W4Y0 310 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 NKAIN2Q5VXU1 208 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 C6orf120Q7Z4R8 191 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 GALNT10Q86SR1 603 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 GID4Q8IVV7 300 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 IFI44Q8TCB0 444 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 NXPE2Q96DL1 559 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 DNAJC27Q9NZQ0 273 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 CCDC59Q9P031 241 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 AASSQ9UDR5 926 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 COLQQ9Y215 455 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 TRBV11-1A0A0K0K1C0 115 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 BLACEA4D250 179 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 EEDO75530 441 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 INMTO95050 263 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 DCDC1P59894 354 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 TUBA1BP68363 451 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 TUBA4AP68366 448 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 FOXC1Q12948 553 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 MEP1AQ16819 746 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 SLC35F1Q5T1Q4 408 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 TUBA1AQ71U36 451 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ERI1Q8IV48 349 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 OR52P1PQ8NH57 321 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 C16orf78Q8WTQ4 265 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 FUBP1Q96AE4 644 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms