RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CLN5O75503 358 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ATP5HO75947 161 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 RHOBTB1O94844 696 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 AGTP01019 485 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ALPPP05187 535 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 FYNP06241 537 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 RETP07949 1114 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ZCCHC18P0CG32 403 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ALPPL2P10696 532 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CASTP20810 708 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 S100A1P23297 94 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PTAFRP25105 342 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PSMA5P28066 241 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CCND2P30279 289 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CHRNA3P32297 505 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MDH1P40925 334 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 RABIFP47224 123 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CCR3P51677 355 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PRELPP51888 382 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CASP9P55211 416 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 RIPK4P57078 832 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 EIF3EP60228 445 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MYL6P60660 151 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 STX1BP61266 288 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MAT1AQ00266 395 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PTK6Q13882 451 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 GAMTQ14353 236 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 BCL2A1Q16548 175 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TTMPQ5BVD1 217 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 IGSF11Q5DX21 431 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 NHSL2Q5HYW2 709 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CFAP157Q5JU67 520 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ZNF658Q5TYW1 1059 aaPredicted RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PRAMEF20Q5VT98 475 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CST9LP1Q5W188 147 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ISLR2Q6UXK2 745 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 KDM7AQ6ZMT4 941 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ARHGAP22Q7Z5H3 698 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TPRA1Q86W33 373 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PRR22Q8IZ63 422 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 C4orf32Q8N8J7 132 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 EIF1ADQ8N9N8 165 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TC2NQ8N9U0 490 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 NEK11Q8NG66 645 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CFAP61Q8NHU2 1237 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SPPL2AQ8TCT8 520 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 DNAJA4Q8WW22 397 aaPredicted RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 KCNE4Q8WWG9 221 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SLC13A3Q8WWT9 602 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 LPGAT1Q92604 370 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SECISBP2Q96T21 854 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SSX3Q99909 188 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TPPP3Q9BW30 176 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MRPL37Q9BZE1 423 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PKIBQ9C010 78 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SLC5A7Q9GZV3 580 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 HDHD2Q9H0R4 259 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 EXO5Q9H790 373 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TLE6Q9H808 572 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 C12orf10Q9HB07 376 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TUFT1Q9NNX1 390 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 IL26Q9NPH9 171 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 PIH1D3Q9NQM4 214 aaKnown RBP3.03□□□□□ -1.92
PTPRK-220ENST00000531466 C8orf4Q9NR00 106 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 CENPMQ9NSP4 180 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MIS18AQ9NYP9 233 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 IL37Q9NZH6 218 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SENP1Q9P0U3 644 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 VPS54Q9P1Q0 977 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TUBGCP4Q9UGJ1 667 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 KIAA1257Q9ULG3 409 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 SELENOKQ9Y6D0 94 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 MAD1L1Q9Y6D9 718 aa3.03□□□□□ -1.92
PTPRK-220ENST00000531466 TDRD6O60522 2096 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TTC21AQ8NDW8 1320 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 A0A075B6Q4 140 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TRBV4-1A0A0J9YWV2 114 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TTC26A0AVF1 554 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 FEZF1A0PJY2 475 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 A4D1N5 150 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 OR5K4A6NMS3 321 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 KRTAP4-16G5E9R7 235 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 HIP1O00291 1037 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TRAFD1O14545 582 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SURF4O15260 269 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MTX2O75431 263 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CRCPO75575 148 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 DIRAS3O95661 229 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 GNA14O95837 355 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 RENP00797 406 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 APOA1P02647 267 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 HAPLN1P10915 354 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 NCF1P14598 390 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 FOSL2P15408 326 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ELAVL4P26378 380 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CD1BP29016 333 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 RANBP1P43487 201 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CAMLGP49069 296 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CCT3P49368 545 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms