RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 FAM162AQ96A26 154 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 ANKRD9Q96BM1 317 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-228ENST00000531007 CTHRC1Q96CG8 243 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 LIN37Q96GY3 246 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-228ENST00000531007 PEX11GQ96HA9 241 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 SLC35G5Q96KT7 338 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 ART5Q96L15 291 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 DGAT2Q96PD7 388 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 MS4A4EQ96PG1 132 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 SPATA5L1Q9BVQ7 753 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 ACTRT3Q9BYD9 372 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 ASPSCR1Q9BZE9 553 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 VCX3BQ9H321 246 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 A4GALTQ9NPC4 353 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 CCM2LQ9NUG4 571 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-228ENST00000531007 CALML5Q9NZT1 146 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 HCN3Q9P1Z3 774 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 NDOR1Q9UHB4 597 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 EGFL7Q9UHF1 273 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 NXT1Q9UKK6 140 aaKnown RBP9.24□□□□□ -0.93
CTNND1-228ENST00000531007 C19orf53Q9UNZ5 99 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-228ENST00000531007 ANGPT4Q9Y264 503 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 PCDHGA8Q9Y5G5 932 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 RP1P56715 2156 aa9.24□□□□□ -0.93
CTNND1-228ENST00000531007 DNAH14Q0VDD8 3507 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 LAMA1P25391 3075 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 DHRS12A0PJE2 317 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 C4orf47A7E2U8 309 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 EFCAB7A8K855 629 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 C5orf58C9J3I9 102 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 FGF17O60258 216 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CREG1O75629 220 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 SORBS2O94875 1100 aaKnown RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 MED26O95402 600 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 KLK3P07288 261 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CTSBP07858 339 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 GUSBP08236 651 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ARAFP10398 606 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 EFNA1P20827 205 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 NT5EP21589 574 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 MATN1P21941 496 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 KDELR2P33947 212 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 MAP2K3P46734 347 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CDK9P50750 372 aaKnown RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 OCA2Q04671 838 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 RCN1Q15293 331 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ADRM1Q16186 407 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 PRICKLE4Q2TBC4 344 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 FAM98BQ52LJ0 330 aaKnown RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ARHGAP40Q5TG30 622 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CDCP2Q5VXM1 449 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 FBXW10Q5XX13 1052 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 FIGNL1Q6PIW4 674 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ASCL5Q7RTU5 278 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 RNF130Q86XS8 419 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 PTOV1Q86YD1 416 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 SPPL2CQ8IUH8 684 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 GALNT12Q8IXK2 581 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ZZZ3Q8IYH5 903 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 LGI4Q8N135 537 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 BMPERQ8N8U9 685 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 PAPD5Q8NDF8 572 aaKnown RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 RCBTB1Q8NDN9 531 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 PLPP5Q8NEB5 264 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 OR9A2Q8NGT5 310 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CLIP3Q96DZ5 547 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 DEPDC7Q96QD5 511 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ZNF607Q96SK3 696 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 STACQ99469 402 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 DDA1Q9BW61 102 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 BTBD2Q9BX70 525 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 SLC26A1Q9H2B4 701 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 TRIM45Q9H8W5 580 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 WDR54Q9H977 334 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CXorf21Q9HAI6 301 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 C8orf4Q9NR00 106 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 RXFP3Q9NSD7 469 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 DCAF13Q9NV06 445 aaKnown RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 EXD2Q9NVH0 621 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 DDX18Q9NVP1 670 aaKnown RBP9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ADPRHL2Q9NX46 363 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 P2RX2Q9UBL9 471 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 TRPC4Q9UBN4 977 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ANAPC2Q9UJX6 822 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 PACSIN3Q9UKS6 424 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 CFL2Q9Y281 166 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 AP4S1Q9Y587 144 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 OTOGLQ3ZCN5 2332 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ADAMTS20P59510 1910 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 ASXL3Q9C0F0 2248 aa9.23□□□□□ -0.93
CTNND1-228ENST00000531007 FAM227AF5H4B4 570 aa9.22□□□□□ -0.93
CTNND1-228ENST00000531007 LDB3O75112 727 aa9.22□□□□□ -0.93
CTNND1-228ENST00000531007 PRKRAO75569 313 aaKnown RBP9.22□□□□□ -0.93
CTNND1-228ENST00000531007 C8orf89P0DMQ9 161 aa9.22□□□□□ -0.93
CTNND1-228ENST00000531007 ANPEPP15144 967 aa9.22□□□□□ -0.93
CTNND1-228ENST00000531007 ATP6V1B2P21281 511 aa9.22□□□□□ -0.93
CTNND1-228ENST00000531007 TGM1P22735 817 aa9.22□□□□□ -0.93
CTNND1-228ENST00000531007 MSX2P35548 267 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-228ENST00000531007 MC3RP41968 323 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms