RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 POT1Q9NUX5 634 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 VNN3Q9NY84 501 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 CNOT2Q9NZN8 540 aaKnown RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 NTMQ9P121 344 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 UTS2RQ9UKP6 389 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 ACAD8Q9UKU7 415 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 RAB23Q9ULC3 237 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 TMCC3Q9ULS5 477 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MMP17Q9ULZ9 603 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 PLAGL1Q9UM63 463 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 MGAT4BQ9UQ53 548 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 KCNK6Q9Y257 313 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 SLC9A8Q9Y2E8 581 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 WDR37Q9Y2I8 494 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 PRKAB1Q9Y478 270 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 PCYT1BQ9Y5K3 369 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 MAGED1Q9Y5V3 778 aaPredicted RBP5.25□□□□□ -1.57
PCF11-205ENST00000530906 PIAS3Q9Y6X2 628 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 U3KQV3 271 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 BRCA2P51587 3418 aa5.25□□□□□ -1.57
PCF11-205ENST00000530906 NUP214P35658 2090 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 IGKV1-8A0A0C4DH67 115 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 A0A1B0GTW7 788 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 MYOCOSA0A1B0GUC4 107 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 A0A1W2PRQ8 180 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 BLACEA4D250 179 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 OR2A25A4D2G3 310 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 A6NCN8 305 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 EFCAB10A6NFE3 127 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ZNF99A8MXY4 864 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 PRAMEF26H0Y7S4 382 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SAP18O00422 153 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 HMGN4O00479 90 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ZSCAN9O15535 394 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 ZW10O43264 779 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 EMC8O43402 210 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ERI3O43414 337 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 TMPRSS11DO60235 418 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 NDUFS2O75306 463 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SH3BGRLO75368 114 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 MFN2O95140 757 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 GABARAPO95166 117 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 GBAP04062 536 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 FUCA1P04066 466 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 NR2F6P10588 404 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 PIPP12273 146 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 IL7RP16871 459 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CD247P20963 164 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 GSTM3P21266 225 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 PCMT1P22061 227 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 PRKACGP22612 351 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CBLP22681 906 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 PSMB5P28074 263 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 TLX1P31314 330 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 IFNGR2P38484 337 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 BCL6P41182 706 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 BUD31P41223 144 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 SOX9P48436 509 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 KCNJ5P48544 419 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SERPINB10P48595 397 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ALDH9A1P49189 494 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CLK3P49761 638 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 BLKP51451 505 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 DGKEP52429 567 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CDC42P60953 191 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SKP1P63208 163 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CYP4F2P78329 520 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 RPP38P78345 283 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 ALDH6A1Q02252 535 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.24□□□□□ -1.57
PCF11-205ENST00000530906 SLAMF1Q13291 335 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 DGCR6Q14129 220 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SIM2Q14190 667 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 CLCA4Q14CN2 919 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 TBCEQ15813 527 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 NEDD8Q15843 81 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 MEP1AQ16819 746 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CTU2Q2VPK5 515 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 SYT6Q5T7P8 510 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 ATAD3BQ5T9A4 648 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 UBE2UQ5VVX9 321 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 GPR107Q5VW38 600 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 DUS1LQ6P1R4 473 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 CD300LDQ6UXZ3 194 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ZNF852Q6ZMS4 543 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ABHD13Q7L211 337 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ABI3BPQ7Z7G0 1075 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ASPGQ86U10 573 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 NRROSQ86YC3 692 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SLC44A2Q8IWA5 706 aaPredicted RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 HS3ST5Q8IZT8 346 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 LGI4Q8N135 537 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 HORMAD2Q8N7B1 307 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 ACOT4Q8N9L9 421 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 TMEM145Q8NBT3 493 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 CAMKVQ8NCB2 501 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 RHOXF1Q8NHV9 184 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 SLC38A5Q8WUX1 472 aa5.24□□□□□ -1.57
PCF11-205ENST00000530906 TRUB1Q8WWH5 349 aaKnown RBP5.24□□□□□ -1.57
PCF11-205ENST00000530906 MAL2Q969L2 176 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms