RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ZNF764Q96H86 408 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 SGCZQ96LD1 299 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 SLX1AQ9BQ83 275 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 CLMPQ9H6B4 373 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 REEP4Q9H6H4 257 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 THAP1Q9NVV9 213 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 CFL2Q9Y281 166 aa11.71□□□□□ -0.53
CCDC90B-216ENST00000529856 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 TENM4Q6N022 2769 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 KLRC4-KLRK1H3BQV0 150 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 AKAP10O43572 662 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 PEX1O43933 1283 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 PLOD3O60568 738 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 LRATO95237 230 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 FBXO45P0C2W1 286 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 PRPS2P11908 318 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 GPX3P22352 226 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 MST1P26927 711 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 NTSP30990 170 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 EMDP50402 254 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 NR0B1P51843 470 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 TDGF1P3P51864 188 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 NCBP2P52298 156 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 EMX2Q04743 252 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 MRPL49Q13405 166 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 PDE7AQ13946 482 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 SMU1Q2TAY7 513 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 IL23RQ5VWK5 629 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 DND1Q8IYX4 353 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 TAGAPQ8N103 731 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 LIX1Q8N485 282 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 FNDC5Q8NAU1 212 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 GOLM1Q8NBJ4 401 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 PSD4Q8NDX1 1056 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 OR52R1Q8NGF1 315 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 CLHC1Q8NHS4 586 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 MTERF3Q96E29 417 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 FRMD6Q96NE9 622 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 AMDHD1Q96NU7 426 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 C1orf50Q9BV19 199 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 GLIPR2Q9H4G4 154 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 SH2D2AQ9NP31 389 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 PRODH2Q9UF12 536 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 DTX4Q9Y2E6 619 aa11.7□□□□□ -0.54
CCDC90B-216ENST00000529856 ESPL1Q14674 2120 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 EML6Q6ZMW3 1958 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ANKUB1A6NFN9 424 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 HMGB1P1B2RPK0 211 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 PLOD2O00469 737 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 KLF11O14901 512 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 SASH3O75995 380 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 SLITRK5O94991 958 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 CNR1P21554 472 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 MEOX1P50221 254 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 DCAF7P61962 342 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 OCRLQ01968 901 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ALDH6A1Q02252 535 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 SRSF11Q05519 484 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 MAD2L1Q13257 205 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ZNF385BQ569K4 471 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 FHL5Q5TD97 284 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ANKRD26P1Q6NSI1 321 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 R3HCC1LQ7Z5L2 792 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 CPSF7Q8N684 471 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 POGLUT1Q8NBL1 392 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 OR7G2Q8NG99 324 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ZNF75CPQ92670 426 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 PPCDCQ96CD2 204 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 SPACA9Q96E40 222 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ITPAQ9BY32 194 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 NUF2Q9BZD4 464 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 NXF5Q9H1B4 397 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ANKRA2Q9H9E1 313 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 DEPPQ9NTK1 212 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ASIC5Q9NY37 505 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 SH3BP4Q9P0V3 963 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 ATP6V1HQ9UI12 483 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 EIF3LQ9Y262 564 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 NPFFR2Q9Y5X5 522 aa11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 RP1L1Q8IWN7 2480 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-216ENST00000529856 A0A087WV62 115 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 CAPN14A8MX76 684 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 WISP2O76076 250 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 IFI6P09912 130 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 DRD5P21918 477 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 RPL3P39023 403 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 PPICP45877 212 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 NRG3P56975 720 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 GPR85P60893 370 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 ELOAQ14241 798 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 PTGR1Q14914 329 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 NTRK2Q16620 822 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 EIF2S3LQ2VIR3 472 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
CCDC90B-216ENST00000529856 SLC22A10Q63ZE4 541 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms