RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SOD3P08294 240 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 CCDC175P0C221 793 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 SLC35E2BP0CK96 405 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 SLC35E2P0CK97 266 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PEPDP12955 493 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 SRD5A1P18405 259 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 ABCD3P28288 659 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 GABRB3P28472 473 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 SRD5A2P31213 254 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 CASP2P42575 452 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 LAPTM5Q13571 262 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 HIST2H2ACQ16777 129 aaPredicted RBP10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 UBAP2Q5T6F2 1119 aaKnown RBP10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 HIST2H2AA3Q6FI13 130 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 GALNT7Q86SF2 657 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 GPR180Q86V85 440 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 WDSUB1Q8N9V3 476 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 MCUQ8NE86 351 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 OR10H5Q8NGA6 315 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 LILRB1Q8NHL6 650 aaPredicted RBP10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 ADIPOR1Q96A54 375 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PTCD3Q96EY7 689 aaKnown RBP10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 C11orf24Q96F05 449 aaPredicted RBP10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 HS6ST2Q96MM7 605 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 EFCAB11Q9BUY7 163 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PHACTR1Q9C0D0 580 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 RNF122Q9H9V4 155 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 SERHLQ9NQF3 203 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PLSCR4Q9NRQ2 329 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 WHRNQ9P202 907 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PHF11Q9UIL8 331 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 CORO1CQ9ULV4 474 aaPredicted RBP10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PROCRQ9UNN8 238 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 VWA7Q9Y334 891 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 OARD1Q9Y530 152 aa10.48□□□□□ -0.73
AMBRA1-207ENST00000529553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■□□ 15.9
AMBRA1-207ENST00000529553 SVEP1Q4LDE5 3571 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 A0A096LNT2 108 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 CLGNO14967 610 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 KCNAB3O43448 404 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 PTGDSP41222 190 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 GDF5P43026 501 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 CASP9P55211 416 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 SLAMF1Q13291 335 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 GUSBP1Q15486 140 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 NRF1Q16656 503 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 RBM20Q5T481 1227 aaKnown RBP10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 OR4C11Q6IEV9 310 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 STAC2Q6ZMT1 411 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 FAM214BQ7L5A3 538 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 PLCZ1Q86YW0 608 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 ZNF615Q8N8J6 731 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 HGDQ93099 445 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 EGFL8Q99944 293 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 OSBPL11Q9BXB4 747 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 HEY2Q9UBP5 337 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 IKZF3Q9UKT9 509 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 DTX4Q9Y2E6 619 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 REXO2Q9Y3B8 237 aaKnown RBP10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 ZNF175Q9Y473 711 aa10.47□□□□□ -0.73
AMBRA1-207ENST00000529553 CR1P17927 2039 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 ELOA3DA6NLF2 546 aaPredicted RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 DLX3O60479 287 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 LMX1BO60663 402 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 AIFM1O95831 613 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 ALDOAP04075 364 aaKnown RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 IL11P20809 199 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 GGT5P36269 586 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 CDKN1AP38936 164 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 BUD31P41223 144 aaPredicted RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 SSR2P43308 183 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 ARFIP1P53367 373 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 SIRPAP78324 504 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 TNFRSF17Q02223 184 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 SQLEQ14534 574 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 ELOA3BQ3SY89 546 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 PAGE2BQ5JRK9 111 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 CNTN4Q8IWV2 1026 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 TXLNBQ8N3L3 684 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 NKAPQ8N5F7 415 aaKnown RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 GBP7Q8N8V2 638 aaPredicted RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 ELOA3Q8NG57 546 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 OR7G1Q8NGA0 311 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 DOK4Q8TEW6 326 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 ZNF473Q8WTR7 871 aaKnown RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 MAIP1Q8WWC4 291 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 SIGLEC10Q96LC7 697 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 SFXN2Q96NB2 322 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 MS4A8Q9BY19 250 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 OR10A5Q9H207 317 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 CXorf21Q9HAI6 301 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 GPR52Q9Y2T5 361 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 RNF115Q9Y4L5 304 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 MAGED1Q9Y5V3 778 aaPredicted RBP10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 SNX8Q9Y5X2 465 aa10.46□□□□□ -0.73
AMBRA1-207ENST00000529553 MED12LQ86YW9 2145 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 IGHV4-30-2A0A087WSY4 118 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 A0A1W2PP18 115 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 C2orf72A6NCS6 295 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms