RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 WDYHV1Q96HA8 205 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
SRPRA-203ENST00000528744 RILPQ96NA2 401 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 MRPL57Q9BQC6 102 aaKnown RBP10.56□□□□□ -0.72
SRPRA-203ENST00000528744 PELOQ9BRX2 385 aaKnown RBP10.56□□□□□ -0.72
SRPRA-203ENST00000528744 C1QTNF3Q9BXJ4 246 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 ITPAQ9BY32 194 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 EPB41L4BQ9H329 900 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 WDR41Q9HAD4 459 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 EHD3Q9NZN3 535 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 ADAM29Q9UKF5 820 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 BOKQ9UMX3 212 aaPredicted RBP10.56□□□□□ -0.72
SRPRA-203ENST00000528744 SLC12A4Q9UP95 1085 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 PHF3Q92576 2039 aaKnown RBP10.56□□□□□ -0.72
SRPRA-203ENST00000528744 MTORP42345 2549 aa10.56□□□□□ -0.72
SRPRA-203ENST00000528744 FAM221AA4D161 298 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 C17orf51A8MQB3 221 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 SYT5O00445 386 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 DYRK3O43781 588 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ERAL1O75616 437 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 TRAPPC6AO75865 159 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 EPPINO95925 133 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 COL6A2P12110 1019 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 PCSK2P16519 638 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 BMP7P18075 431 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 GDF1P27539 372 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 PTPN6P29350 595 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 DNAJA1P31689 397 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ARL1P40616 181 aaPredicted RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 EMDP50402 254 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF136P52737 540 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 NAGLUP54802 743 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 PHEXP78562 749 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 MRPS35P82673 323 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 CKAP4Q07065 602 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 IFT88Q13099 833 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 RPS6KA2Q15349 733 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 TMEM198Q66K66 360 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 TTC19Q6DKK2 380 aaPredicted RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 VASNQ6EMK4 673 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 SCIMPQ6UWF3 145 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ARSKQ6UWY0 536 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 SPNS3Q6ZMD2 512 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 WDR53Q7Z5U6 358 aaPredicted RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 YRDCQ86U90 279 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ZZZ3Q8IYH5 903 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 TAGAPQ8N103 731 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 C1orf52Q8N6N3 182 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 WDSUB1Q8N9V3 476 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 SELENOMQ8WWX9 145 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 APIPQ96GX9 242 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF559Q9BR84 538 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 UGT2B28Q9BY64 529 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 MRPL46Q9H2W6 279 aaKnown RBP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 GALNT9Q9HCQ5 603 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.55□□□□□ -0.72
SRPRA-203ENST00000528744 QPCTLQ9NXS2 382 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 KCNN3Q9UGI6 736 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF180Q9UJW8 692 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 PLLPQ9Y342 182 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 IKBKGQ9Y6K9 419 aa10.55□□□□□ -0.72
SRPRA-203ENST00000528744 MED13LQ71F56 2210 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 FREM3P0C091 2139 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 C15orf38-AP3S2A0A0A6YYH1 394 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 MANBAO00462 879 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 SMIM24O75264 130 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 UGT2B11O75310 529 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 CTAG2O75638 210 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 GABRA1P14867 456 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 SERPINB9P50453 376 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 MAPK12P53778 367 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 IST1P53990 364 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 HMGCS1Q01581 520 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 CLCQ05315 142 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 WHAMMP3Q1A5X7 153 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 ACSF3Q4G176 576 aaPredicted RBP10.54□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF678Q5SXM1 525 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 TEX35Q5T0J7 233 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 TIGD3Q6B0B8 471 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 CCDC116Q8IYX3 515 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 DND1Q8IYX4 353 aaKnown RBP10.54□□□□□ -0.72
SRPRA-203ENST00000528744 CDYL2Q8N8U2 506 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 MYRIPQ8NFW9 859 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 OR7G1Q8NGA0 311 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 OR52R1Q8NGF1 315 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 TMEM237Q96Q45 408 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 KCNA7Q96RP8 456 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 FMO2Q99518 471 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 BRINP2Q9C0B6 783 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 PRDM14Q9GZV8 571 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 ELOVL6Q9H5J4 265 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 AHSPQ9NZD4 102 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 CRIM1Q9NZV1 1036 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms